Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL139413.1-201ENST00000421309 217 ntBASIC2□□□□□ -2.09
CKAP4Q07065 ERLEC1P1-201ENST00000433806 578 ntBASIC2□□□□□ -2.09
CKAP4Q07065 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2□□□□□ -2.09
CKAP4Q07065 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2□□□□□ -2.09
CKAP4Q07065 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2□□□□□ -2.09
CKAP4Q07065 RPS3AP12-201ENST00000443616 753 ntBASIC2□□□□□ -2.09
CKAP4Q07065 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2□□□□□ -2.09
CKAP4Q07065 HMGN2P26-201ENST00000463169 339 ntBASIC2□□□□□ -2.09
CKAP4Q07065 AC114786.4-201ENST00000508771 728 ntBASIC2□□□□□ -2.09
CKAP4Q07065 AC023141.11-201ENST00000508864 202 ntBASIC2□□□□□ -2.09
CKAP4Q07065 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2□□□□□ -2.09
CKAP4Q07065 RNU5F-8P-201ENST00000515941 111 ntBASIC2□□□□□ -2.09
CKAP4Q07065 RNU2-69P-201ENST00000516061 100 ntBASIC2□□□□□ -2.09
CKAP4Q07065 RNA5SP165-201ENST00000517142 115 ntBASIC2□□□□□ -2.09
CKAP4Q07065 MTND4P7-201ENST00000523876 130 ntBASIC2□□□□□ -2.09
CKAP4Q07065 CENPUP1-201ENST00000526649 1202 ntBASIC2□□□□□ -2.09
CKAP4Q07065 LARP7P3-201ENST00000579888 337 ntBASIC2□□□□□ -2.09
CKAP4Q07065 MIR548AC-201ENST00000585049 88 ntBASIC2□□□□□ -2.09
CKAP4Q07065 DUSP12P1-201ENST00000612874 516 ntBASIC2□□□□□ -2.09
CKAP4Q07065 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2□□□□□ -2.09
CKAP4Q07065 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2□□□□□ -2.09
CKAP4Q07065 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2□□□□□ -2.09
CKAP4Q07065 CASC19-280ENST00000642102 1351 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
CKAP4Q07065 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
CKAP4Q07065 RNU6-778P-201ENST00000363269 103 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 RNU6-395P-201ENST00000365662 106 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 RNU6-393P-201ENST00000384475 107 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 MT-TL1-201ENST00000386347 75 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 SNORD70.1-201ENST00000391007 85 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 RNU2-68P-201ENST00000410878 191 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.99□□□□□ -2.09
CKAP4Q07065 AC138393.2-201ENST00000414742 246 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 MTND4LP11-201ENST00000422184 280 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.99□□□□□ -2.09
CKAP4Q07065 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.99□□□□□ -2.09
CKAP4Q07065 BRK1P2-201ENST00000442875 223 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 EEF1B2P7-201ENST00000451177 676 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 RNU6-1208P-201ENST00000459588 107 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 RPL21P99-201ENST00000480369 423 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.99□□□□□ -2.09
CKAP4Q07065 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.99□□□□□ -2.09
CKAP4Q07065 Y_RNA.665-201ENST00000516177 98 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 SNORA20.3-201ENST00000516880 132 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 RNU6-703P-201ENST00000516946 107 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.99□□□□□ -2.09
CKAP4Q07065 BNIP3P6-201ENST00000549284 499 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CKAP4Q07065 HMGN2P15-201ENST00000585707 270 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 AC073539.2-201ENST00000597113 165 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
CKAP4Q07065 AP003400.5-201ENST00000624827 617 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.99□□□□□ -2.09
CKAP4Q07065 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CKAP4Q07065 AC121333.1-201ENST00000567488 2709 ntBASIC1.99□□□□□ -2.09
CKAP4Q07065 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.98□□□□□ -2.09
CKAP4Q07065 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.98□□□□□ -2.09
CKAP4Q07065 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
CKAP4Q07065 Y_RNA.33-201ENST00000362591 102 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 SNORA80A-201ENST00000363922 136 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 Y_RNA.303-201ENST00000364998 94 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 Y_RNA.378-201ENST00000365652 113 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CKAP4Q07065 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKAP4Q07065 RNU6-434P-201ENST00000384376 107 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 RNU6-45P-201ENST00000384471 107 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 SNORD37.1-201ENST00000390968 65 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 RNU6-332P-201ENST00000391193 108 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 SNORA40C-201ENST00000391285 128 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 MIR888-201ENST00000401186 77 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AL356776.1-201ENST00000406574 447 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 RNU6-1025P-201ENST00000410629 104 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.98□□□□□ -2.09
CKAP4Q07065 AL353621.1-201ENST00000418219 243 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.98□□□□□ -2.09
CKAP4Q07065 SKA2P1-201ENST00000425592 390 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.98□□□□□ -2.09
CKAP4Q07065 OSTCP8-201ENST00000445117 448 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 NDUFB1P2-201ENST00000449477 176 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 RPL12P25-201ENST00000455592 494 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 RNU7-167P-201ENST00000459160 62 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.98□□□□□ -2.09
CKAP4Q07065 AC139453.3-201ENST00000493276 369 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 Y_RNA.654-201ENST00000497848 106 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 MTCO2P30-201ENST00000503662 364 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.98□□□□□ -2.09
CKAP4Q07065 AC108043.1-201ENST00000512696 574 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC112206.3-201ENST00000514578 389 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKAP4Q07065 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.98□□□□□ -2.09
CKAP4Q07065 AC090115.3-201ENST00000553218 849 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
CKAP4Q07065 MIR5692A1-201ENST00000580523 69 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.98□□□□□ -2.09
CKAP4Q07065 AC018638.8-201ENST00000588755 281 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC092807.2-201ENST00000609367 243 ntBASIC1.98□□□□□ -2.09
CKAP4Q07065 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
CKAP4Q07065 AC244517.12-201ENST00000623581 663 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms