Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AP001836.1-201ENST00000604675 523 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CX3CL1P78423 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CX3CL1P78423 AC002543.1-201ENST00000299783 1954 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AC000403.1-201ENST00000613696 3585 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.35□□□□□ -2.03
CX3CL1P78423 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.35□□□□□ -2.03
CX3CL1P78423 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CX3CL1P78423 RNU6-529P-201ENST00000363383 104 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 SNORA70.4-201ENST00000365509 134 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 RNU6-43P-201ENST00000384302 107 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 RNU6-1222P-201ENST00000384615 107 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 FO393413.1-201ENST00000402892 195 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.35□□□□□ -2.03
CX3CL1P78423 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.35□□□□□ -2.03
CX3CL1P78423 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.35□□□□□ -2.03
CX3CL1P78423 EIF4EP4-201ENST00000424916 578 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AC008267.5-201ENST00000424928 265 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AC092427.1-202ENST00000430569 476 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.35□□□□□ -2.03
CX3CL1P78423 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.35□□□□□ -2.03
CX3CL1P78423 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.35□□□□□ -2.03
CX3CL1P78423 U8.21-201ENST00000459536 136 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 RPL9P9-202ENST00000466501 579 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 RPS27AP9-201ENST00000477681 438 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 Y_RNA.682-201ENST00000516457 100 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 SNORA70.24-201ENST00000517233 118 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 HPRT1P3-201ENST00000539521 576 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.35□□□□□ -2.03
CX3CL1P78423 AC107016.2-201ENST00000547968 190 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.35□□□□□ -2.03
CX3CL1P78423 MIR3117-201ENST00000584034 78 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AC091135.1-201ENST00000585943 307 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AL356280.1-201ENST00000603614 379 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.35□□□□□ -2.03
CX3CL1P78423 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CX3CL1P78423 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AL159153.1-201ENST00000619688 317 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 AC007792.1-201ENST00000623023 402 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CX3CL1P78423 MTND4P27-201ENST00000450813 1354 ntBASIC2.35□□□□□ -2.03
CX3CL1P78423 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CX3CL1P78423 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CL1P78423 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CX3CL1P78423 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CX3CL1P78423 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CX3CL1P78423 OR56A5-201ENST00000340110 738 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RNU1-72P-201ENST00000362976 153 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 Y_RNA.151-201ENST00000363566 112 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 SNORD32A-201ENST00000364805 84 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 SNORD81.2-201ENST00000365153 76 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CL1P78423 RNU6-220P-201ENST00000390919 107 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CL1P78423 RPL21P75-201ENST00000396599 483 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AL360182.1-201ENST00000397433 468 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RPL21P28-201ENST00000401418 483 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 U6atac.2-201ENST00000408644 118 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AP000275.1-201ENST00000411943 390 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CX3CL1P78423 MTND4LP11-201ENST00000422184 280 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 MTATP6P23-201ENST00000440153 476 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RPS3AP12-201ENST00000443616 753 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AL031659.1-201ENST00000447075 539 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CL1P78423 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CL1P78423 RPL21P39-201ENST00000463605 483 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RPS29P27-201ENST00000463711 170 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RPS29P2-201ENST00000479278 136 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AC087190.1-201ENST00000484462 480 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CL1P78423 AC093591.1-201ENST00000491435 481 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RPL21P16-201ENST00000495531 483 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 RNA5SP341-201ENST00000516261 117 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AC109329.1-201ENST00000518744 317 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CL1P78423 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.34□□□□□ -2.03
CX3CL1P78423 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CL1P78423 MIR4790-201ENST00000577799 79 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 CPDP1-201ENST00000579660 283 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AC069294.1-201ENST00000608397 350 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AL133215.3-201ENST00000609801 448 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AL359198.2-201ENST00000611836 194 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 uc_338.5-201ENST00000611839 155 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 AL355073.2-201ENST00000612106 557 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.34□□□□□ -2.03
CX3CL1P78423 AL162274.2-201ENST00000614406 332 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 uc_338.15-201ENST00000615470 191 ntBASIC2.34□□□□□ -2.03
CX3CL1P78423 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
CX3CL1P78423 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.34□□□□□ -2.04
CX3CL1P78423 AC009487.2-201ENST00000420969 6821 ntBASIC2.34□□□□□ -2.04
CX3CL1P78423 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CX3CL1P78423 RNA5SP387-201ENST00000364226 106 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 SNORD56.5-201ENST00000364281 72 ntBASIC2.33□□□□□ -2.04
CX3CL1P78423 U3.13-201ENST00000364804 214 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms