Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-308P-201ENST00000390957 107 ntBASIC2.94□□□□□ -1.94
RAE1P78406 snosnR66.1-201ENST00000391095 99 ntBASIC2.94□□□□□ -1.94
RAE1P78406 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
RAE1P78406 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.94□□□□□ -1.94
RAE1P78406 AC107626.1-201ENST00000471084 183 ntBASIC2.94□□□□□ -1.94
RAE1P78406 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.94□□□□□ -1.94
RAE1P78406 AP001025.1-201ENST00000486139 332 ntBASIC2.94□□□□□ -1.94
RAE1P78406 AC068781.1-201ENST00000488231 618 ntBASIC2.94□□□□□ -1.94
RAE1P78406 RPL17P19-201ENST00000489069 552 ntBASIC2.94□□□□□ -1.94
RAE1P78406 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.94□□□□□ -1.94
RAE1P78406 AC009812.2-201ENST00000517657 457 ntBASIC2.94□□□□□ -1.94
RAE1P78406 AC025281.1-201ENST00000567026 265 ntBASIC2.94□□□□□ -1.94
RAE1P78406 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RAE1P78406 AL356157.2-201ENST00000605122 111 ntBASIC2.94□□□□□ -1.94
RAE1P78406 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.94□□□□□ -1.94
RAE1P78406 AC091925.1-201ENST00000623204 462 ntBASIC2.94□□□□□ -1.94
RAE1P78406 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RAE1P78406 MAPK10-362ENST00000641864 4484 ntBASIC2.93□□□□□ -1.94
RAE1P78406 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 AC073325.2-201ENST00000339545 159 ntBASIC2.93□□□□□ -1.94
RAE1P78406 SNORA33.2-201ENST00000365413 134 ntBASIC2.93□□□□□ -1.94
RAE1P78406 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
RAE1P78406 SNORA22B-201ENST00000383876 138 ntBASIC2.93□□□□□ -1.94
RAE1P78406 Y_RNA.533-201ENST00000384596 114 ntBASIC2.93□□□□□ -1.94
RAE1P78406 RNU6-19P-201ENST00000384718 107 ntBASIC2.93□□□□□ -1.94
RAE1P78406 RNU1-101P-201ENST00000391171 127 ntBASIC2.93□□□□□ -1.94
RAE1P78406 RNU4-47P-201ENST00000410876 114 ntBASIC2.93□□□□□ -1.94
RAE1P78406 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.93□□□□□ -1.94
RAE1P78406 NUP35P1-201ENST00000422734 947 ntBASIC2.93□□□□□ -1.94
RAE1P78406 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.93□□□□□ -1.94
RAE1P78406 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.93□□□□□ -1.94
RAE1P78406 AL353997.1-201ENST00000432936 108 ntBASIC2.93□□□□□ -1.94
RAE1P78406 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.93□□□□□ -1.94
RAE1P78406 RNU6-120P-201ENST00000516077 103 ntBASIC2.93□□□□□ -1.94
RAE1P78406 RNU6-699P-201ENST00000517081 110 ntBASIC2.93□□□□□ -1.94
RAE1P78406 RN7SKP295-201ENST00000517264 153 ntBASIC2.93□□□□□ -1.94
RAE1P78406 RNU6-988P-201ENST00000519081 107 ntBASIC2.93□□□□□ -1.94
RAE1P78406 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.93□□□□□ -1.94
RAE1P78406 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
RAE1P78406 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 MIR5680-201ENST00000577577 84 ntBASIC2.93□□□□□ -1.94
RAE1P78406 MIR4429-201ENST00000580105 73 ntBASIC2.93□□□□□ -1.94
RAE1P78406 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
RAE1P78406 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 AC019176.2-201ENST00000611579 315 ntBASIC2.93□□□□□ -1.94
RAE1P78406 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.93□□□□□ -1.94
RAE1P78406 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RAE1P78406 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAE1P78406 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.92□□□□□ -1.94
RAE1P78406 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.92□□□□□ -1.94
RAE1P78406 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.92□□□□□ -1.94
RAE1P78406 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 MTND5P1-201ENST00000445440 1375 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RBBP8P1-201ENST00000449447 1844 ntBASIC2.92□□□□□ -1.94
RAE1P78406 Y_RNA.48-201ENST00000362710 103 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNY1P16-201ENST00000363063 111 ntBASIC2.92□□□□□ -1.94
RAE1P78406 Y_RNA.123-201ENST00000363338 102 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNU1-105P-201ENST00000363470 161 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNU6-595P-201ENST00000363944 107 ntBASIC2.92□□□□□ -1.94
RAE1P78406 SNORD32A-201ENST00000364805 84 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNU1-140P-201ENST00000365040 165 ntBASIC2.92□□□□□ -1.94
RAE1P78406 Y_RNA.422-201ENST00000384054 114 ntBASIC2.92□□□□□ -1.94
RAE1P78406 Y_RNA.428-201ENST00000384078 102 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNU6-622P-201ENST00000384272 103 ntBASIC2.92□□□□□ -1.94
RAE1P78406 SNORD15B-201ENST00000384714 146 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNVU1-14-201ENST00000384770 164 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RNA5SP120-201ENST00000410900 112 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RPL23AP95-201ENST00000426806 265 ntBASIC2.92□□□□□ -1.94
RAE1P78406 RPL21P40-201ENST00000428586 483 ntBASIC2.92□□□□□ -1.94
RAE1P78406 AC099799.1-201ENST00000439809 192 ntBASIC2.92□□□□□ -1.94
RAE1P78406 AC012308.1-201ENST00000451232 178 ntBASIC2.92□□□□□ -1.94
RAE1P78406 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.92□□□□□ -1.94
RAE1P78406 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.92□□□□□ -1.94
RAE1P78406 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.92□□□□□ -1.94
RAE1P78406 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 MIR3186-201ENST00000577404 85 ntBASIC2.92□□□□□ -1.94
RAE1P78406 AC090897.2-201ENST00000581715 130 ntBASIC2.92□□□□□ -1.94
RAE1P78406 AC006504.6-201ENST00000590142 199 ntBASIC2.92□□□□□ -1.94
RAE1P78406 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 AC008739.3-201ENST00000603262 127 ntBASIC2.92□□□□□ -1.94
RAE1P78406 AC005034.5-201ENST00000604219 466 ntBASIC2.92□□□□□ -1.94
RAE1P78406 AC016925.2-201ENST00000605108 242 ntBASIC2.92□□□□□ -1.94
RAE1P78406 PART1_1.1-201ENST00000611761 217 ntBASIC2.92□□□□□ -1.94
RAE1P78406 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
RAE1P78406 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RAE1P78406 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RAE1P78406 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RAE1P78406 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
RAE1P78406 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RAE1P78406 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RAE1P78406 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.91□□□□□ -1.94
RAE1P78406 Y_RNA.148-201ENST00000363557 117 ntBASIC2.91□□□□□ -1.94
RAE1P78406 Y_RNA.162-201ENST00000363683 102 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms