Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 Y_RNA.571-201ENST00000384753 98 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 FTH1P15-201ENST00000406984 280 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC245047.4-201ENST00000433189 144 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC087477.1-201ENST00000465747 340 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 RPL30P1-201ENST00000488676 339 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC116655.1-201ENST00000508324 901 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 Y_RNA.700-201ENST00000516806 100 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 SNORA31.19-201ENST00000517079 126 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AP000763.2-201ENST00000540641 163 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA4P78363 AC136618.2-201ENST00000575091 400 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 BNIP3P30-201ENST00000601184 574 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC069545.1-201ENST00000605671 358 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 PIGPP2-201ENST00000411569 458 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.47□□□□□ -2.33
ABCA4P78363 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA4P78363 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA4P78363 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.47□□□□□ -2.33
ABCA4P78363 AC027119.1-201ENST00000440877 241 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AL358794.1-201ENST00000445689 381 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.47□□□□□ -2.33
ABCA4P78363 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ABCA4P78363 AC121161.1-201ENST00000510606 652 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA4P78363 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA4P78363 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA4P78363 AL512310.8-201ENST00000550183 120 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 HMGB1P33-201ENST00000563485 527 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 Pinc.1-201ENST00000616452 154 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AP000676.3-201ENST00000623299 569 ntBASIC0.47□□□□□ -2.33
ABCA4P78363 AC092447.10-201ENST00000620607 1652 ntBASIC0.46□□□□□ -2.33
ABCA4P78363 RNU6-23P-201ENST00000363283 107 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 SNORA4.1-201ENST00000364263 144 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 RNU6-650P-201ENST00000365658 111 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 MIR19B1-201ENST00000384829 87 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 ISCA1P1-201ENST00000426679 387 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 GTF2IP3-201ENST00000433887 494 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 COX7BP2-201ENST00000437976 242 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.46□□□□□ -2.34
ABCA4P78363 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.46□□□□□ -2.34
ABCA4P78363 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.46□□□□□ -2.34
ABCA4P78363 AP000860.1-201ENST00000605250 559 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 AC106800.4-201ENST00000614905 153 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 AC008993.2-201ENST00000631744 806 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 U6.99-201ENST00000637524 83 ntBASIC0.46□□□□□ -2.34
ABCA4P78363 snoU2_19.1-201ENST00000362361 80 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 Y_RNA.142-201ENST00000363491 102 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-549P-201ENST00000384433 107 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-932P-201ENST00000391108 106 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AL606489.2-201ENST00000433886 234 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 CECR9-201ENST00000453421 199 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 CYP4A27P-201ENST00000567218 190 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 VN1R82P-201ENST00000601481 356 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AC112220.2-201ENST00000605513 533 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AC010975.3-201ENST00000618727 978 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-1210P-201ENST00000363775 107 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-1164P-201ENST00000364428 107 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 SUGT1P1-201ENST00000379514 476 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-968P-201ENST00000384076 107 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-481P-201ENST00000384194 107 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU6-1207P-201ENST00000384343 107 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 MIR186-201ENST00000384988 86 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNA5SP63-201ENST00000391225 112 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 RNU2-23P-201ENST00000410545 195 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.45□□□□□ -2.34
ABCA4P78363 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.45□□□□□ -2.34
ABCA4P78363 AL591043.1-201ENST00000432461 424 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.45□□□□□ -2.34
ABCA4P78363 TMEM251P1-201ENST00000503717 318 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.45□□□□□ -2.34
ABCA4P78363 SLC2A13P1-201ENST00000531560 322 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 AL161798.1-201ENST00000604630 131 ntBASIC0.45□□□□□ -2.34
ABCA4P78363 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.45□□□□□ -2.34
ABCA4P78363 AL442644.1-201ENST00000454390 3105 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 MIR409-201ENST00000362237 79 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
ABCA4P78363 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.44□□□□□ -2.34
ABCA4P78363 PIGFP2-201ENST00000421400 651 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.44□□□□□ -2.34
ABCA4P78363 MTND2P20-201ENST00000440805 661 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AL096829.2-201ENST00000446582 742 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA4P78363 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.44□□□□□ -2.34
ABCA4P78363 RPF2P2-201ENST00000504693 896 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA4P78363 EIF4A1P12-201ENST00000551910 141 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA4P78363 AC126365.2-201ENST00000580630 379 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AL022345.2-201ENST00000606307 135 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AC240442.1-201ENST00000616055 283 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AL357080.1-201ENST00000617394 239 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AC123767.1-202ENST00000620407 817 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 MIR100-201ENST00000385259 80 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 DHFRP6-201ENST00000401776 268 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 RPL21P111-201ENST00000418453 477 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 BTF3L4P3-201ENST00000418879 476 ntBASIC0.44□□□□□ -2.34
ABCA4P78363 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.44□□□□□ -2.34
ABCA4P78363 RNFT1P2-201ENST00000443064 757 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms