Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.66□□□□□ -1.98
RPS3AP61247 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPS3AP61247 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
RPS3AP61247 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.65□□□□□ -1.98
RPS3AP61247 AC073325.2-201ENST00000339545 159 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 SNORD113-7-201ENST00000363762 77 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 RNU6-1210P-201ENST00000363775 107 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 RNU6-1329P-201ENST00000365664 107 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 MIR450B-201ENST00000401182 78 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.65□□□□□ -1.99
RPS3AP61247 COTL1P1-201ENST00000422309 375 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.65□□□□□ -1.99
RPS3AP61247 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.65□□□□□ -1.99
RPS3AP61247 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.65□□□□□ -1.99
RPS3AP61247 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.65□□□□□ -1.99
RPS3AP61247 CYP2C59P-201ENST00000457790 269 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AL121594.1-201ENST00000475906 575 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC103975.1-201ENST00000482506 483 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC090096.1-201ENST00000489168 390 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 SNORA59B-202ENST00000578183 701 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC100830.2-201ENST00000581636 240 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AL356157.2-201ENST00000605122 111 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 FAM157A-202ENST00000615155 405 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC002553.4-201ENST00000616896 331 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC241585.2-209ENST00000638217 143 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPS3AP61247 AL035425.3-201ENST00000564206 4996 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 AC096644.4-201ENST00000563417 2912 ntBASIC2.65□□□□□ -1.99
RPS3AP61247 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPS3AP61247 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPS3AP61247 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RPS3AP61247 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.64□□□□□ -1.99
RPS3AP61247 Y_RNA.40-201ENST00000362645 93 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNU6-254P-201ENST00000363377 107 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNA5SP125-201ENST00000364843 120 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNA5SP240-201ENST00000365355 128 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNU6-1072P-201ENST00000384703 107 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNU6-443P-201ENST00000384780 107 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AL445529.1-201ENST00000398713 389 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPS3AP61247 RNU2-63P-201ENST00000410792 194 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.64□□□□□ -1.99
RPS3AP61247 AC009161.1-201ENST00000417306 376 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AIMP1P2-201ENST00000425294 312 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 RNU6-1037P-201ENST00000459571 107 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 MTCYBP18-201ENST00000501056 747 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 FAM206BP-201ENST00000510179 541 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AC115990.1-201ENST00000526957 301 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AP000907.4-201ENST00000604143 237 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AL138963.2-201ENST00000605137 226 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 AC009233.1-201ENST00000616477 371 ntBASIC2.64□□□□□ -1.99
RPS3AP61247 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
RPS3AP61247 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.64□□□□□ -1.99
RPS3AP61247 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RPS3AP61247 RNU1-35P-201ENST00000362782 153 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 RNU6-128P-201ENST00000383976 107 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 RNU6-692P-201ENST00000384496 107 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 CBX3P9-201ENST00000402326 552 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.63□□□□□ -1.99
RPS3AP61247 AC236972.1-201ENST00000433225 199 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 SNAP23P1-201ENST00000433229 246 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.63□□□□□ -1.99
RPS3AP61247 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.63□□□□□ -1.99
RPS3AP61247 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.63□□□□□ -1.99
RPS3AP61247 AC090515.1-201ENST00000465295 476 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 RPL30P1-201ENST00000488676 339 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 CKS1BP2-201ENST00000497342 240 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 AC008628.2-201ENST00000502605 298 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 AF213884.2-201ENST00000510417 903 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.63□□□□□ -1.99
RPS3AP61247 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.63□□□□□ -1.99
RPS3AP61247 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.63□□□□□ -1.99
RPS3AP61247 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 LARP7P3-201ENST00000579888 337 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.63□□□□□ -1.99
RPS3AP61247 AL713866.2-201ENST00000603579 219 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 CTHRC1P1-201ENST00000605383 469 ntBASIC2.63□□□□□ -1.99
RPS3AP61247 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
RPS3AP61247 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.62□□□□□ -1.99
RPS3AP61247 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPS3AP61247 UBE2V1P4-201ENST00000425374 344 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 MTATP6P13-201ENST00000438531 667 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.62□□□□□ -1.99
RPS3AP61247 MRPL50P4-201ENST00000446432 475 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.62□□□□□ -1.99
RPS3AP61247 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.62□□□□□ -1.99
RPS3AP61247 RNU6-1332P-201ENST00000516666 104 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.62□□□□□ -1.99
RPS3AP61247 AC064836.2-201ENST00000609491 462 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 HMGB1P24-202ENST00000615653 685 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 AC008121.3-201ENST00000618726 433 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 AL160394.1-201ENST00000624765 724 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 AL137790.1-201ENST00000634283 177 ntBASIC2.62□□□□□ -1.99
RPS3AP61247 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.62□□□□□ -1.99
RPS3AP61247 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms