Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.41□□□□□ -2.34
POLR2JP52435 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
POLR2JP52435 CR383656.8-201ENST00000549046 145 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AC060771.1-201ENST00000582031 164 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 BNIP3P9-201ENST00000603714 553 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AL358072.1-201ENST00000604156 575 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AL356094.1-201ENST00000624663 1212 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 MTND4P21-201ENST00000453886 1357 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
POLR2JP52435 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.4□□□□□ -2.34
POLR2JP52435 AC010615.1-201ENST00000594254 1764 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
POLR2JP52435 MIR520E-201ENST00000384867 87 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 EBAG9P1-201ENST00000418955 543 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 ISCA1P6-201ENST00000427740 390 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.4□□□□□ -2.35
POLR2JP52435 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.4□□□□□ -2.35
POLR2JP52435 BET1P1-201ENST00000482276 359 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 PDCD5P2-201ENST00000507570 312 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.4□□□□□ -2.35
POLR2JP52435 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.4□□□□□ -2.35
POLR2JP52435 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.4□□□□□ -2.35
POLR2JP52435 AC022432.1-201ENST00000595739 310 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 AC008751.2-201ENST00000597885 980 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.4□□□□□ -2.35
POLR2JP52435 AL590229.1-201ENST00000603497 542 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 AL442644.1-201ENST00000454390 3105 ntBASIC0.4□□□□□ -2.35
POLR2JP52435 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 SNORA63D-201ENST00000364359 132 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 SNORD114-24-201ENST00000365029 72 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
POLR2JP52435 RNU6-1122P-201ENST00000384449 107 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 RNU6-331P-201ENST00000384724 107 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.39□□□□□ -2.35
POLR2JP52435 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 snoU13.30-201ENST00000458951 104 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AC104563.1-201ENST00000476147 376 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 RNA5SP168-201ENST00000516642 112 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 RN7SKP49-201ENST00000516675 260 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 RNU6-143P-201ENST00000516942 93 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 SNORA70.22-201ENST00000517160 124 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AC091163.3-201ENST00000518269 1144 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.39□□□□□ -2.35
POLR2JP52435 MTATP6P3-201ENST00000581686 676 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.39□□□□□ -2.35
POLR2JP52435 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
POLR2JP52435 AL451064.1-201ENST00000607718 471 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 RMST_4.1-201ENST00000616886 107 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AL159153.1-201ENST00000619688 317 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AP000676.3-201ENST00000623299 569 ntBASIC0.39□□□□□ -2.35
POLR2JP52435 AL079343.1-201ENST00000572358 1771 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 RNU6-212P-201ENST00000362642 104 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 Y_RNA.534-201ENST00000384599 112 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 MIR19A-201ENST00000384878 82 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
POLR2JP52435 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
POLR2JP52435 AL357139.1-201ENST00000407792 426 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 MIR1276-201ENST00000408707 83 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 RNU2-7P-201ENST00000410794 178 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2JP52435 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2JP52435 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.38□□□□□ -2.35
POLR2JP52435 MTCO1P3-201ENST00000429327 192 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 TXNL1P1-201ENST00000429528 554 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2JP52435 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 ZFAND6P1-201ENST00000434138 605 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2JP52435 GTF2IP13-201ENST00000438487 386 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2JP52435 HMGB1P30-201ENST00000492455 606 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 FABP5P5-201ENST00000515537 406 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 RNA5SP481-201ENST00000516814 122 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 RNU6-64P-201ENST00000517119 105 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 RNA5SP490-201ENST00000517141 136 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AC092325.1-201ENST00000566449 554 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2JP52435 AP000654.2-201ENST00000605633 586 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AL512643.1-201ENST00000635735 524 ntBASIC0.38□□□□□ -2.35
POLR2JP52435 AC245060.5-201ENST00000610778 3293 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
POLR2JP52435 SNORA4.3-201ENST00000365564 137 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 Y_RNA.408-201ENST00000383987 102 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 SNORA75B-201ENST00000384053 137 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 AL079342.2-201ENST00000403367 482 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 BX664727.1-201ENST00000416024 466 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.37□□□□□ -2.35
POLR2JP52435 AC012308.1-201ENST00000451232 178 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
POLR2JP52435 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 MIR449C-201ENST00000516047 92 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 AC090142.3-201ENST00000519012 385 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.37□□□□□ -2.35
POLR2JP52435 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
POLR2JP52435 AC112204.3-201ENST00000623822 332 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms