Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-227P-201ENST00000362865 103 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RNU6-1252P-201ENST00000363054 104 ntBASIC3.1□□□□□ -1.91
NEK3P51956 SNORD32A-201ENST00000364805 84 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RNU6-43P-201ENST00000384302 107 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RNU6-933P-201ENST00000384424 107 ntBASIC3.1□□□□□ -1.91
NEK3P51956 MIR181B1-201ENST00000385240 110 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RNU6-876P-201ENST00000391295 104 ntBASIC3.1□□□□□ -1.91
NEK3P51956 BTF3L4P2-201ENST00000392798 346 ntBASIC3.1□□□□□ -1.91
NEK3P51956 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEK3P51956 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEK3P51956 MTND3P8-201ENST00000412909 339 ntBASIC3.1□□□□□ -1.91
NEK3P51956 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RPL21P111-201ENST00000418453 477 ntBASIC3.1□□□□□ -1.91
NEK3P51956 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK3P51956 AL139396.1-201ENST00000421137 167 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.1□□□□□ -1.91
NEK3P51956 AC003685.2-201ENST00000422795 395 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC008267.5-201ENST00000424928 265 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AIMP1P2-201ENST00000425294 312 ntBASIC3.1□□□□□ -1.91
NEK3P51956 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.1□□□□□ -1.91
NEK3P51956 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK3P51956 AC025465.4-201ENST00000513422 638 ntBASIC3.1□□□□□ -1.91
NEK3P51956 SNORA25.11-201ENST00000515935 105 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RNU4-49P-201ENST00000516080 140 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RNU6-612P-201ENST00000516909 102 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC107953.1-201ENST00000522216 297 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC022080.3-201ENST00000544433 482 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC016256.1-201ENST00000547971 354 ntBASIC3.1□□□□□ -1.91
NEK3P51956 CPDP1-201ENST00000579660 283 ntBASIC3.1□□□□□ -1.91
NEK3P51956 MIR3136-201ENST00000583498 78 ntBASIC3.1□□□□□ -1.91
NEK3P51956 RPL30P11-203ENST00000598995 310 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC104237.2-201ENST00000612456 443 ntBASIC3.1□□□□□ -1.91
NEK3P51956 AC008121.3-201ENST00000618726 433 ntBASIC3.1□□□□□ -1.91
NEK3P51956 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.1□□□□□ -1.91
NEK3P51956 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
NEK3P51956 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEK3P51956 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NEK3P51956 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
NEK3P51956 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEK3P51956 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.91
NEK3P51956 Y_RNA.160-201ENST00000363677 92 ntBASIC3.09□□□□□ -1.91
NEK3P51956 Y_RNA.166-201ENST00000363730 102 ntBASIC3.09□□□□□ -1.91
NEK3P51956 RNU6-767P-201ENST00000384132 107 ntBASIC3.09□□□□□ -1.91
NEK3P51956 SNORA54-201ENST00000384281 123 ntBASIC3.09□□□□□ -1.91
NEK3P51956 SNORD67-201ENST00000390833 111 ntBASIC3.09□□□□□ -1.91
NEK3P51956 RN7SKP32-201ENST00000410167 303 ntBASIC3.09□□□□□ -1.91
NEK3P51956 RNU2-63P-201ENST00000410792 194 ntBASIC3.09□□□□□ -1.91
NEK3P51956 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
NEK3P51956 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
NEK3P51956 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK3P51956 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK3P51956 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK3P51956 AL133396.1-201ENST00000432048 687 ntBASIC3.09□□□□□ -1.91
NEK3P51956 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NEK3P51956 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
NEK3P51956 AMD1P1-201ENST00000457220 922 ntBASIC3.09□□□□□ -1.91
NEK3P51956 AC073901.1-201ENST00000462471 408 ntBASIC3.09□□□□□ -1.91
NEK3P51956 AC016632.1-201ENST00000503994 196 ntBASIC3.09□□□□□ -1.91
NEK3P51956 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.09□□□□□ -1.91
NEK3P51956 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK3P51956 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.09□□□□□ -1.91
NEK3P51956 MIR3942-201ENST00000585264 109 ntBASIC3.09□□□□□ -1.91
NEK3P51956 AC018889.1-201ENST00000605372 397 ntBASIC3.09□□□□□ -1.91
NEK3P51956 AC093732.2-201ENST00000607950 274 ntBASIC3.09□□□□□ -1.91
NEK3P51956 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
NEK3P51956 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.92
NEK3P51956 AC000403.1-201ENST00000613696 3585 ntBASIC3.08□□□□□ -1.92
NEK3P51956 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NEK3P51956 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NEK3P51956 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK3P51956 CBX3P1-201ENST00000325243 554 ntBASIC3.08□□□□□ -1.92
NEK3P51956 EIF1AXP1-201ENST00000419267 435 ntBASIC3.08□□□□□ -1.92
NEK3P51956 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.08□□□□□ -1.92
NEK3P51956 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
NEK3P51956 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.08□□□□□ -1.92
NEK3P51956 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
NEK3P51956 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.08□□□□□ -1.92
NEK3P51956 MTND3P10-201ENST00000450967 341 ntBASIC3.08□□□□□ -1.92
NEK3P51956 AC130509.1-201ENST00000464158 433 ntBASIC3.08□□□□□ -1.92
NEK3P51956 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
NEK3P51956 AL117351.2-201ENST00000513571 157 ntBASIC3.08□□□□□ -1.92
NEK3P51956 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.08□□□□□ -1.92
NEK3P51956 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.08□□□□□ -1.92
NEK3P51956 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.08□□□□□ -1.92
NEK3P51956 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.08□□□□□ -1.92
NEK3P51956 AL133215.3-201ENST00000609801 448 ntBASIC3.08□□□□□ -1.92
NEK3P51956 AC069234.5-201ENST00000611056 416 ntBASIC3.08□□□□□ -1.92
NEK3P51956 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.08□□□□□ -1.92
NEK3P51956 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEK3P51956 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NEK3P51956 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.08□□□□□ -1.92
NEK3P51956 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK3P51956 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
NEK3P51956 RNU1-72P-201ENST00000362976 153 ntBASIC3.07□□□□□ -1.92
NEK3P51956 Y_RNA.301-201ENST00000364990 103 ntBASIC3.07□□□□□ -1.92
NEK3P51956 RNU6-95P-201ENST00000384697 107 ntBASIC3.07□□□□□ -1.92
NEK3P51956 MIR29B2-201ENST00000385055 81 ntBASIC3.07□□□□□ -1.92
NEK3P51956 MIR95-201ENST00000385072 81 ntBASIC3.07□□□□□ -1.92
NEK3P51956 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
NEK3P51956 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms