Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 RNU6-1038P-201ENST00000516516 104 ntBASIC2.95□□□□□ -1.94
CTCFP49711 Y_RNA.687-201ENST00000516558 91 ntBASIC2.95□□□□□ -1.94
CTCFP49711 SNORA25.17-201ENST00000517184 124 ntBASIC2.95□□□□□ -1.94
CTCFP49711 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.95□□□□□ -1.94
CTCFP49711 CENPUP1-201ENST00000526649 1202 ntBASIC2.95□□□□□ -1.94
CTCFP49711 AC007151.1-201ENST00000572774 483 ntBASIC2.95□□□□□ -1.94
CTCFP49711 DISC2.1-201ENST00000612827 205 ntBASIC2.95□□□□□ -1.94
CTCFP49711 AL449363.1-201ENST00000617815 186 ntBASIC2.95□□□□□ -1.94
CTCFP49711 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTCFP49711 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTCFP49711 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.94□□□□□ -1.94
CTCFP49711 OR4G1P-203ENST00000641984 1631 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AC135776.4-201ENST00000624300 1904 ntBASIC2.94□□□□□ -1.94
CTCFP49711 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
CTCFP49711 RNU6-942P-201ENST00000363002 107 ntBASIC2.94□□□□□ -1.94
CTCFP49711 RNU6-534P-201ENST00000364877 106 ntBASIC2.94□□□□□ -1.94
CTCFP49711 RNU4-66P-201ENST00000365199 138 ntBASIC2.94□□□□□ -1.94
CTCFP49711 SET-203ENST00000372688 801 ntTSL 2 BASIC2.94□□□□□ -1.94
CTCFP49711 SNORA26.9-201ENST00000391322 122 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AL121601.2-201ENST00000438019 707 ntBASIC2.94□□□□□ -1.94
CTCFP49711 CALM1P1-201ENST00000442082 433 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.94□□□□□ -1.94
CTCFP49711 AP000705.1-201ENST00000454567 350 ntBASIC2.94□□□□□ -1.94
CTCFP49711 RN7SL297P-201ENST00000483161 293 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AC091885.1-201ENST00000506658 268 ntBASIC2.94□□□□□ -1.94
CTCFP49711 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
CTCFP49711 RNA5SP281-201ENST00000516504 135 ntBASIC2.94□□□□□ -1.94
CTCFP49711 RNU6-295P-201ENST00000516901 104 ntBASIC2.94□□□□□ -1.94
CTCFP49711 MTND4LP26-201ENST00000518144 282 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.94□□□□□ -1.94
CTCFP49711 AC010525.2-201ENST00000590920 195 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AC002044.1-201ENST00000606707 158 ntBASIC2.94□□□□□ -1.94
CTCFP49711 U2.17-201ENST00000611454 95 ntBASIC2.94□□□□□ -1.94
CTCFP49711 RMST_3.1-201ENST00000611651 109 ntBASIC2.94□□□□□ -1.94
CTCFP49711 AC011890.2-201ENST00000613393 294 ntBASIC2.94□□□□□ -1.94
CTCFP49711 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.94□□□□□ -1.94
CTCFP49711 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.94□□□□□ -1.94
CTCFP49711 MIR6873-201ENST00000622788 63 ntBASIC2.94□□□□□ -1.94
CTCFP49711 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.94□□□□□ -1.94
CTCFP49711 AC092881.1-201ENST00000638218 2733 ntBASIC2.94□□□□□ -1.94
CTCFP49711 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTCFP49711 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.93□□□□□ -1.94
CTCFP49711 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.93□□□□□ -1.94
CTCFP49711 Y_RNA.167-201ENST00000363735 109 ntBASIC2.93□□□□□ -1.94
CTCFP49711 RNU6-266P-201ENST00000364225 107 ntBASIC2.93□□□□□ -1.94
CTCFP49711 Y_RNA.231-201ENST00000364358 102 ntBASIC2.93□□□□□ -1.94
CTCFP49711 Y_RNA.324-201ENST00000365165 102 ntBASIC2.93□□□□□ -1.94
CTCFP49711 RNU6-1280P-201ENST00000365211 107 ntBASIC2.93□□□□□ -1.94
CTCFP49711 Y_RNA.378-201ENST00000365652 113 ntBASIC2.93□□□□□ -1.94
CTCFP49711 Y_RNA.480-201ENST00000384364 102 ntBASIC2.93□□□□□ -1.94
CTCFP49711 OR9R1P-201ENST00000412200 877 ntBASIC2.93□□□□□ -1.94
CTCFP49711 SNRPEP10-201ENST00000420249 274 ntBASIC2.93□□□□□ -1.94
CTCFP49711 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.93□□□□□ -1.94
CTCFP49711 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.93□□□□□ -1.94
CTCFP49711 MICF-203ENST00000432679 129 ntBASIC2.93□□□□□ -1.94
CTCFP49711 RPS29P25-201ENST00000481709 171 ntBASIC2.93□□□□□ -1.94
CTCFP49711 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.93□□□□□ -1.94
CTCFP49711 RNU5F-8P-201ENST00000515941 111 ntBASIC2.93□□□□□ -1.94
CTCFP49711 ACA59.2-201ENST00000517061 156 ntBASIC2.93□□□□□ -1.94
CTCFP49711 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.93□□□□□ -1.94
CTCFP49711 AC243972.3-201ENST00000539655 198 ntBASIC2.93□□□□□ -1.94
CTCFP49711 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTCFP49711 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.93□□□□□ -1.94
CTCFP49711 AC107304.1-201ENST00000604229 296 ntBASIC2.93□□□□□ -1.94
CTCFP49711 AC007014.2-201ENST00000615581 479 ntBASIC2.93□□□□□ -1.94
CTCFP49711 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.93□□□□□ -1.94
CTCFP49711 AC024614.3-201ENST00000637860 256 ntBASIC2.93□□□□□ -1.94
CTCFP49711 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.92□□□□□ -1.94
CTCFP49711 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.92□□□□□ -1.94
CTCFP49711 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
CTCFP49711 RNU6-82P-201ENST00000363970 107 ntBASIC2.92□□□□□ -1.94
CTCFP49711 RNU6-522P-201ENST00000364497 107 ntBASIC2.92□□□□□ -1.94
CTCFP49711 Y_RNA.453-201ENST00000384223 109 ntBASIC2.92□□□□□ -1.94
CTCFP49711 FTH1P15-201ENST00000406984 280 ntBASIC2.92□□□□□ -1.94
CTCFP49711 RNU6-321P-201ENST00000410912 106 ntBASIC2.92□□□□□ -1.94
CTCFP49711 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.92□□□□□ -1.94
CTCFP49711 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.92□□□□□ -1.94
CTCFP49711 PTGES3P4-201ENST00000426243 356 ntBASIC2.92□□□□□ -1.94
CTCFP49711 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.92□□□□□ -1.94
CTCFP49711 AC007677.1-201ENST00000445757 515 ntBASIC2.92□□□□□ -1.94
CTCFP49711 FGF7P6-202ENST00000451282 293 ntBASIC2.92□□□□□ -1.94
CTCFP49711 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.92□□□□□ -1.94
CTCFP49711 AC087884.1-201ENST00000469738 328 ntBASIC2.92□□□□□ -1.94
CTCFP49711 AC092989.1-201ENST00000481235 277 ntBASIC2.92□□□□□ -1.94
CTCFP49711 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.92□□□□□ -1.94
CTCFP49711 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.92□□□□□ -1.94
CTCFP49711 AP004607.1-201ENST00000524456 203 ntBASIC2.92□□□□□ -1.94
CTCFP49711 NDUFA5P6-201ENST00000542110 379 ntBASIC2.92□□□□□ -1.94
CTCFP49711 AC026464.5-201ENST00000562497 722 ntBASIC2.92□□□□□ -1.94
CTCFP49711 MIR3670-2-201ENST00000582974 65 ntBASIC2.92□□□□□ -1.94
CTCFP49711 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.92□□□□□ -1.94
CTCFP49711 MIR3670-1-201ENST00000584160 65 ntBASIC2.92□□□□□ -1.94
CTCFP49711 MIR3670-3-201ENST00000584855 65 ntBASIC2.92□□□□□ -1.94
CTCFP49711 VN1R80P-201ENST00000597126 338 ntBASIC2.92□□□□□ -1.94
CTCFP49711 RNU6-89P-201ENST00000606519 100 ntBASIC2.92□□□□□ -1.94
CTCFP49711 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CTCFP49711 MIR3670-4-201ENST00000612260 65 ntBASIC2.92□□□□□ -1.94
CTCFP49711 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CTCFP49711 RMST_7.1-201ENST00000621935 268 ntBASIC2.92□□□□□ -1.94
CTCFP49711 Z69720.2-201ENST00000624755 279 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms