Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.83□□□□□ -2.12
CASP4P49662 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.83□□□□□ -2.12
CASP4P49662 AC006512.1-201ENST00000468816 291 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC104136.1-201ENST00000512969 394 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.83□□□□□ -2.12
CASP4P49662 OR5AL2P-201ENST00000532185 920 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.83□□□□□ -2.12
CASP4P49662 AC137800.2-201ENST00000574375 120 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
CASP4P49662 NIFKP6-201ENST00000598115 845 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC245014.2-201ENST00000603689 287 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC246785.4-201ENST00000605374 287 ntBASIC1.83□□□□□ -2.12
CASP4P49662 MIR98-201ENST00000606724 119 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC091931.1-201ENST00000623488 728 ntBASIC1.83□□□□□ -2.12
CASP4P49662 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CASP4P49662 ZNF702P-202ENST00000434269 1966 ntBASIC1.82□□□□□ -2.12
CASP4P49662 Y_RNA.169-201ENST00000363745 96 ntBASIC1.82□□□□□ -2.12
CASP4P49662 RNU6-116P-201ENST00000384042 109 ntBASIC1.82□□□□□ -2.12
CASP4P49662 RNU6-297P-201ENST00000384636 107 ntBASIC1.82□□□□□ -2.12
CASP4P49662 MIR454-201ENST00000390180 115 ntBASIC1.82□□□□□ -2.12
CASP4P49662 RNU6-607P-201ENST00000411283 108 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC092447.3-201ENST00000426027 686 ntBASIC1.82□□□□□ -2.12
CASP4P49662 RPL31P35-201ENST00000431058 377 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AL591043.1-201ENST00000432461 424 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.82□□□□□ -2.12
CASP4P49662 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.82□□□□□ -2.12
CASP4P49662 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.82□□□□□ -2.12
CASP4P49662 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.82□□□□□ -2.12
CASP4P49662 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC010486.2-201ENST00000505572 483 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC074344.1-201ENST00000512823 224 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC117532.1-201ENST00000514638 323 ntBASIC1.82□□□□□ -2.12
CASP4P49662 SNORD27.1-201ENST00000516319 72 ntBASIC1.82□□□□□ -2.12
CASP4P49662 SNORA18.6-201ENST00000516792 115 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC060788.1-201ENST00000521318 469 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.82□□□□□ -2.12
CASP4P49662 AC018630.3-201ENST00000542637 96 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC073539.2-201ENST00000597113 165 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AL136363.2-201ENST00000604173 851 ntBASIC1.82□□□□□ -2.12
CASP4P49662 Z94722.1-201ENST00000604328 474 ntBASIC1.82□□□□□ -2.12
CASP4P49662 AC064872.1-201ENST00000604823 1072 ntBASIC1.82□□□□□ -2.12
CASP4P49662 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.82□□□□□ -2.12
CASP4P49662 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CASP4P49662 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
CASP4P49662 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.81□□□□□ -2.12
CASP4P49662 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CASP4P49662 RNU6-1287P-201ENST00000362914 107 ntBASIC1.81□□□□□ -2.12
CASP4P49662 RNU6-74P-201ENST00000384235 107 ntBASIC1.81□□□□□ -2.12
CASP4P49662 RNU6-1060P-201ENST00000384664 107 ntBASIC1.81□□□□□ -2.12
CASP4P49662 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CASP4P49662 RNU6-550P-201ENST00000391057 101 ntBASIC1.81□□□□□ -2.12
CASP4P49662 RNU6-248P-201ENST00000410720 107 ntBASIC1.81□□□□□ -2.12
CASP4P49662 RNA5SP450-201ENST00000411206 102 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.81□□□□□ -2.12
CASP4P49662 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.81□□□□□ -2.12
CASP4P49662 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.81□□□□□ -2.12
CASP4P49662 MTND2P18-201ENST00000419962 1030 ntBASIC1.81□□□□□ -2.12
CASP4P49662 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.81□□□□□ -2.12
CASP4P49662 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.81□□□□□ -2.12
CASP4P49662 MTCO3P9-201ENST00000506989 781 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.81□□□□□ -2.12
CASP4P49662 MTND3P25-201ENST00000509243 135 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.81□□□□□ -2.12
CASP4P49662 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.81□□□□□ -2.12
CASP4P49662 AP003392.2-201ENST00000527269 208 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AP002453.2-201ENST00000533503 320 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AC022616.8-201ENST00000533569 253 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AC091135.1-201ENST00000585943 307 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AC006566.1-201ENST00000608943 513 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AC091834.1-201ENST00000614543 472 ntBASIC1.81□□□□□ -2.12
CASP4P49662 AC011155.2-201ENST00000623202 216 ntBASIC1.81□□□□□ -2.12
CASP4P49662 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.81□□□□□ -2.12
CASP4P49662 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
CASP4P49662 Y_RNA.40-201ENST00000362645 93 ntBASIC1.8□□□□□ -2.12
CASP4P49662 SNORA62.1-201ENST00000364287 154 ntBASIC1.8□□□□□ -2.12
CASP4P49662 RNU6-45P-201ENST00000384471 107 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.8□□□□□ -2.12
CASP4P49662 AL590556.1-201ENST00000423231 483 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.8□□□□□ -2.12
CASP4P49662 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.8□□□□□ -2.12
CASP4P49662 RPL23AP3-201ENST00000453844 468 ntBASIC1.8□□□□□ -2.12
CASP4P49662 RNU7-182P-201ENST00000459009 62 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.8□□□□□ -2.12
CASP4P49662 MTND2P33-201ENST00000506452 1031 ntBASIC1.8□□□□□ -2.12
CASP4P49662 MTCYBP40-201ENST00000509390 1135 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.8□□□□□ -2.12
CASP4P49662 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.8□□□□□ -2.12
CASP4P49662 CYCSP27-201ENST00000527643 293 ntBASIC1.8□□□□□ -2.12
CASP4P49662 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.8□□□□□ -2.12
CASP4P49662 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.8□□□□□ -2.12
CASP4P49662 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.8□□□□□ -2.12
CASP4P49662 AC012414.6-201ENST00000568241 401 ntBASIC1.8□□□□□ -2.12
CASP4P49662 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
CASP4P49662 uc_338.11-201ENST00000619132 160 ntBASIC1.8□□□□□ -2.12
CASP4P49662 AP000770.2-201ENST00000623694 100 ntBASIC1.8□□□□□ -2.12
CASP4P49662 SEPT14P19-203ENST00000633205 211 ntBASIC1.8□□□□□ -2.12
CASP4P49662 MTND4P23-201ENST00000447723 1363 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms