Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC109446.1-201ENST00000566172 220 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 AC093249.1-201ENST00000567049 203 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.51□□□□□ -2.01
HOXA1P49639 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HOXA1P49639 AC024153.1-201ENST00000603103 365 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 AC005046.1-201ENST00000608515 625 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 AC241585.2-209ENST00000638217 143 ntBASIC2.51□□□□□ -2.01
HOXA1P49639 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXA1P49639 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HOXA1P49639 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA1P49639 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA1P49639 RNU6-1180P-201ENST00000364935 107 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HOXA1P49639 RNU6-890P-201ENST00000384121 107 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 MIR134-201ENST00000385258 73 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AL513475.1-201ENST00000406602 315 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA1P49639 MTCO2P27-201ENST00000420740 428 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 MTCO2P12-201ENST00000427426 682 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXA1P49639 RPS15AP10-201ENST00000432472 382 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 RPS29P6-201ENST00000438196 145 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 RPS12P18-201ENST00000442381 270 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA1P49639 Y_RNA.653-201ENST00000459091 95 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 SNRPGP7-201ENST00000469016 106 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA1P49639 AC091874.1-201ENST00000511402 339 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AC093303.1-201ENST00000514549 295 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 RNA5SP367-201ENST00000516557 118 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 RNU6-612P-201ENST00000516909 102 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 SNORA31.18-201ENST00000517043 134 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA1P49639 AC022634.1-201ENST00000520765 532 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 NACAP3-201ENST00000552100 481 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AC034105.4-201ENST00000568304 277 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 CPDP1-201ENST00000579660 283 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 MIR2682-201ENST00000580305 110 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 BNIP3P22-201ENST00000593399 556 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXA1P49639 PISRT1.1-201ENST00000616930 107 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXA1P49639 AC039056.2-201ENST00000622261 511 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 AC012442.3-202ENST00000636742 206 ntBASIC2.5□□□□□ -2.01
HOXA1P49639 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA1P49639 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HOXA1P49639 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXA1P49639 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HOXA1P49639 RNU6-933P-201ENST00000384424 107 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 RNU6-308P-201ENST00000390957 107 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AL365496.1-201ENST00000426885 215 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AC243964.1-201ENST00000441814 261 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA1P49639 SNORD5.1-201ENST00000458800 75 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXA1P49639 MED28P2-201ENST00000475771 317 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 RN7SL633P-201ENST00000488974 297 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 RPS27P26-201ENST00000494583 239 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 RAC1P5-201ENST00000512182 576 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AC109479.2-201ENST00000517842 174 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA1P49639 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA1P49639 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA1P49639 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA1P49639 AC009163.5-201ENST00000575421 637 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXA1P49639 MIR3158-1-201ENST00000583596 81 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA1P49639 AC091152.3-201ENST00000604227 325 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 AC098657.3-201ENST00000620434 263 ntBASIC2.49□□□□□ -2.01
HOXA1P49639 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA1P49639 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA1P49639 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA1P49639 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXA1P49639 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXA1P49639 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXA1P49639 AC010889.1-201ENST00000566193 2666 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 RBBP8P1-201ENST00000449447 1844 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 Y_RNA.216-201ENST00000364205 93 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 RNU4-76P-201ENST00000364509 141 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 RNU6-593P-201ENST00000364716 112 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXA1P49639 RNU6-474P-201ENST00000384243 107 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.48□□□□□ -2.01
HOXA1P49639 AC074117.2-201ENST00000417130 397 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXA1P49639 HMGN2P31-201ENST00000432430 273 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 AL353997.1-201ENST00000432936 108 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 AC004383.1-201ENST00000438135 289 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 AL358232.1-201ENST00000448030 501 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 RPS29P27-201ENST00000463711 170 ntBASIC2.48□□□□□ -2.01
HOXA1P49639 SNORA25.11-201ENST00000515935 105 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms