Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFSF9P41273 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFSF9P41273 snoU109.1-201ENST00000459339 135 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 RNA5SP57-201ENST00000459463 123 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
TNFSF9P41273 RNU6-123P-201ENST00000516163 102 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AP005660.1-201ENST00000522972 293 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFSF9P41273 AC103987.3-201ENST00000582071 292 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 MIR548AC-201ENST00000585049 88 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.63□□□□□ -2.15
TNFSF9P41273 BNIP3P8-201ENST00000597863 560 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC012493.3-201ENST00000604494 112 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 Z82243.1-201ENST00000609432 473 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC138749.5-201ENST00000611461 208 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC122133.1-201ENST00000613964 233 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC116165.2-201ENST00000616705 206 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
TNFSF9P41273 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TNFSF9P41273 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.63□□□□□ -2.15
TNFSF9P41273 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
TNFSF9P41273 MIR337-201ENST00000362281 93 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 SNORD14B-201ENST00000364533 90 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 MT-TH-201ENST00000387441 69 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 SNORD115.1-201ENST00000391109 76 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 RNU11-3P-201ENST00000391111 133 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TNFSF9P41273 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 USP9YP12-201ENST00000450481 570 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.62□□□□□ -2.15
TNFSF9P41273 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFSF9P41273 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.62□□□□□ -2.15
TNFSF9P41273 RPL30P6-201ENST00000475925 342 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.62□□□□□ -2.15
TNFSF9P41273 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.62□□□□□ -2.15
TNFSF9P41273 AC108078.2-201ENST00000510750 236 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 Y_RNA.687-201ENST00000516558 91 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 RNU6-965P-201ENST00000516721 96 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.62□□□□□ -2.15
TNFSF9P41273 AC145350.1-201ENST00000567426 208 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.62□□□□□ -2.15
TNFSF9P41273 AC112191.3-201ENST00000604371 277 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 AC012360.2-201ENST00000609349 391 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 AL603839.4-201ENST00000624658 1005 ntBASIC1.62□□□□□ -2.15
TNFSF9P41273 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
TNFSF9P41273 HAUS6P2-201ENST00000433254 2404 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TNFSF9P41273 RNU6-743P-201ENST00000364151 106 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 RNU6-487P-201ENST00000365430 104 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.61□□□□□ -2.15
TNFSF9P41273 SNORA8-201ENST00000384574 139 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 RPS3AP36-201ENST00000398190 775 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 RNU2-48P-201ENST00000410694 191 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AC137499.1-201ENST00000427602 88 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AL365400.1-201ENST00000431854 640 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.61□□□□□ -2.15
TNFSF9P41273 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.61□□□□□ -2.15
TNFSF9P41273 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 RBBP4P6-201ENST00000508098 202 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TNFSF9P41273 SNORA31.23-201ENST00000517219 133 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AC106038.2-201ENST00000520706 568 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AC022616.3-201ENST00000523940 148 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.61□□□□□ -2.15
TNFSF9P41273 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.61□□□□□ -2.15
TNFSF9P41273 RPL21P5-201ENST00000554662 472 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AC005771.1-201ENST00000585581 349 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AL138889.2-201ENST00000603883 242 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AC092354.1-201ENST00000606057 376 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AL121992.2-201ENST00000606262 256 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.61□□□□□ -2.15
TNFSF9P41273 uc_338.5-201ENST00000611839 155 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AL359314.1-201ENST00000616913 261 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 AP000770.2-201ENST00000623694 100 ntBASIC1.61□□□□□ -2.15
TNFSF9P41273 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.61□□□□□ -2.15
TNFSF9P41273 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TNFSF9P41273 AC103710.2-202ENST00000641454 2853 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TNFSF9P41273 RNU5F-7P-201ENST00000363696 115 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 RNU6-1210P-201ENST00000363775 107 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 RNU6-622P-201ENST00000384272 103 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 MIR29C-201ENST00000385231 88 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 MRPL42P2-201ENST00000403169 426 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 MIR1262-201ENST00000408276 93 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 RNA5SP111-201ENST00000411386 101 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFSF9P41273 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.6□□□□□ -2.15
TNFSF9P41273 MTCO3P5-201ENST00000433620 714 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AC245102.2-201ENST00000448956 180 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 NDUFB1P2-201ENST00000449477 176 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFSF9P41273 PRELID3BP1-201ENST00000457142 540 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.6□□□□□ -2.15
TNFSF9P41273 AP001025.1-201ENST00000486139 332 ntBASIC1.6□□□□□ -2.15
TNFSF9P41273 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFSF9P41273 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.6□□□□□ -2.15
TNFSF9P41273 FABP5P5-201ENST00000515537 406 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms