Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR578-201ENST00000384828 96 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 SNRPEP8-201ENST00000442866 260 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.52□□□□□ -2.01
HNF4AP41235 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 AC083904.1-201ENST00000487828 231 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.52□□□□□ -2.01
HNF4AP41235 AC096725.1-201ENST00000514266 313 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 RNU2-69P-201ENST00000516061 100 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 RNU6-1314P-201ENST00000517139 104 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 RPL7P20-201ENST00000520308 745 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.52□□□□□ -2.01
HNF4AP41235 PSMA3P-201ENST00000555485 635 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 AC027176.1-201ENST00000560204 514 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 MIR4319-201ENST00000577285 85 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 UBE2V2P2-201ENST00000587677 504 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 CTHRC1P1-201ENST00000605383 469 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 AC092807.2-201ENST00000609367 243 ntBASIC2.52□□□□□ -2.01
HNF4AP41235 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
HNF4AP41235 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HNF4AP41235 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.51□□□□□ -2.01
HNF4AP41235 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HNF4AP41235 MTND4P12-201ENST00000498999 1377 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HNF4AP41235 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HNF4AP41235 CBX3P1-201ENST00000325243 554 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 Y_RNA.72-201ENST00000362894 103 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 U3.12-201ENST00000364498 214 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.51□□□□□ -2.01
HNF4AP41235 SNORA32.2-201ENST00000384049 122 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HNF4AP41235 RNU4-26P-201ENST00000410270 107 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
HNF4AP41235 RPL21P90-201ENST00000415692 466 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 USP9YP20-201ENST00000419224 558 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AL513185.2-201ENST00000425543 193 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.51□□□□□ -2.01
HNF4AP41235 PRPS1P1-201ENST00000445305 876 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AL360271.2-201ENST00000447710 161 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AL583843.1-201ENST00000456070 346 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 RNU6-1208P-201ENST00000459588 107 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC068781.1-201ENST00000488231 618 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC022493.1-201ENST00000492984 337 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.51□□□□□ -2.01
HNF4AP41235 AC114781.4-201ENST00000513707 639 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 LRRC34P2-201ENST00000514850 553 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.51□□□□□ -2.01
HNF4AP41235 AC073539.2-201ENST00000597113 165 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC021646.1-201ENST00000605469 484 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC096772.1-201ENST00000609146 564 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 Z82243.1-201ENST00000609432 473 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC009233.1-201ENST00000616477 371 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC009248.2-201ENST00000619826 254 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 AC005858.4-201ENST00000623191 700 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.51□□□□□ -2.01
HNF4AP41235 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HNF4AP41235 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.51□□□□□ -2.01
HNF4AP41235 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HNF4AP41235 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HNF4AP41235 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HNF4AP41235 MIR412-201ENST00000362142 91 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 SNORD62.1-201ENST00000362541 86 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-845P-201ENST00000362578 103 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-859P-201ENST00000362728 107 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-82P-201ENST00000363970 107 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 SNORA75B-201ENST00000384053 137 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-767P-201ENST00000384132 107 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-45P-201ENST00000384471 107 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-831P-201ENST00000384548 107 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 FTH1P15-201ENST00000406984 280 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 POLHP1-201ENST00000411806 470 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 PDCL2P1-201ENST00000419302 352 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC108938.1-201ENST00000451204 136 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.5□□□□□ -2.01
HNF4AP41235 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.5□□□□□ -2.01
HNF4AP41235 AC007547.1-201ENST00000462177 490 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 Y_RNA.654-201ENST00000497848 106 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
HNF4AP41235 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.5□□□□□ -2.01
HNF4AP41235 FAM206BP-201ENST00000510179 541 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC104136.1-201ENST00000512969 394 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC046134.1-201ENST00000514454 666 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 CKS1BP7-201ENST00000522230 235 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 MTCO3P23-201ENST00000561363 289 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.5□□□□□ -2.01
HNF4AP41235 MYL12BP1-201ENST00000569826 507 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
HNF4AP41235 BNIP3P25-201ENST00000596023 559 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms