Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX11P35716 U1.1-201ENST00000384101 164 ntBASIC4.46□□□□□ -1.7
SOX11P35716 AC140479.3-201ENST00000418944 1126 ntBASIC4.46□□□□□ -1.7
SOX11P35716 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX11P35716 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX11P35716 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX11P35716 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.46□□□□□ -1.7
SOX11P35716 RN7SL481P-201ENST00000477764 299 ntBASIC4.46□□□□□ -1.7
SOX11P35716 RPL36AP48-201ENST00000485521 314 ntBASIC4.46□□□□□ -1.7
SOX11P35716 RNU6-344P-201ENST00000516635 111 ntBASIC4.46□□□□□ -1.7
SOX11P35716 RNU2-44P-201ENST00000516795 194 ntBASIC4.46□□□□□ -1.7
SOX11P35716 AC022726.1-201ENST00000587475 207 ntBASIC4.46□□□□□ -1.7
SOX11P35716 AL121932.1-201ENST00000605542 214 ntBASIC4.46□□□□□ -1.7
SOX11P35716 AL034408.1-202ENST00000636088 415 ntBASIC4.46□□□□□ -1.7
SOX11P35716 AC068205.3-201ENST00000636385 468 ntBASIC4.46□□□□□ -1.7
SOX11P35716 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX11P35716 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SOX11P35716 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX11P35716 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SOX11P35716 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX11P35716 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX11P35716 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SOX11P35716 MAPK10-286ENST00000641208 8747 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RNU1-94P-201ENST00000362627 173 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RNU4-17P-201ENST00000365598 141 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RNU1-57P-201ENST00000384491 166 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RNU6-763P-201ENST00000390865 106 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RNA5SP332-201ENST00000391063 115 ntBASIC4.45□□□□□ -1.7
SOX11P35716 U3.39-201ENST00000408569 239 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RNU5E-9P-201ENST00000411164 104 ntBASIC4.45□□□□□ -1.7
SOX11P35716 Z74021.1-201ENST00000423610 407 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AL645608.4-201ENST00000423619 154 ntBASIC4.45□□□□□ -1.7
SOX11P35716 DNAJC19P7-201ENST00000428811 344 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX11P35716 HMGN2P20-201ENST00000437531 273 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX11P35716 AL031183.1-201ENST00000457667 207 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RN7SL354P-201ENST00000469282 294 ntBASIC4.45□□□□□ -1.7
SOX11P35716 DEFB131C-201ENST00000528817 165 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AC133555.2-201ENST00000550213 292 ntBASIC4.45□□□□□ -1.7
SOX11P35716 MIR548AI-201ENST00000579940 88 ntBASIC4.45□□□□□ -1.7
SOX11P35716 RN7SL176P-201ENST00000580352 264 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX11P35716 AL391813.1-201ENST00000603098 260 ntBASIC4.45□□□□□ -1.7
SOX11P35716 AC108706.1-201ENST00000611053 297 ntBASIC4.45□□□□□ -1.7
SOX11P35716 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SOX11P35716 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SOX11P35716 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX11P35716 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX11P35716 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX11P35716 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX11P35716 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SOX11P35716 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX11P35716 Y_RNA.182-201ENST00000363880 111 ntBASIC4.44□□□□□ -1.7
SOX11P35716 SNORA70F-201ENST00000384142 135 ntBASIC4.44□□□□□ -1.7
SOX11P35716 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
SOX11P35716 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX11P35716 SNORA71B-202ENST00000439232 272 ntBASIC4.44□□□□□ -1.7
SOX11P35716 RPS20P10-201ENST00000451209 253 ntBASIC4.44□□□□□ -1.7
SOX11P35716 RPS3P1-201ENST00000456781 192 ntBASIC4.44□□□□□ -1.7
SOX11P35716 U8.19-201ENST00000459095 133 ntBASIC4.44□□□□□ -1.7
SOX11P35716 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX11P35716 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX11P35716 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX11P35716 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX11P35716 ATP5J2P6-201ENST00000565203 266 ntBASIC4.44□□□□□ -1.7
SOX11P35716 MIR5699-201ENST00000578903 90 ntBASIC4.44□□□□□ -1.7
SOX11P35716 AL133393.1-201ENST00000603277 287 ntBASIC4.44□□□□□ -1.7
SOX11P35716 AL670379.2-201ENST00000604983 252 ntBASIC4.44□□□□□ -1.7
SOX11P35716 AC023043.4-201ENST00000612081 449 ntBASIC4.44□□□□□ -1.7
SOX11P35716 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SOX11P35716 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SOX11P35716 AF127577.6-201ENST00000623352 2191 ntBASIC4.44□□□□□ -1.7
SOX11P35716 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX11P35716 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX11P35716 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SOX11P35716 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
SOX11P35716 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX11P35716 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX11P35716 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SOX11P35716 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX11P35716 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX11P35716 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX11P35716 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX11P35716 RNU1-20P-201ENST00000363314 162 ntBASIC4.43□□□□□ -1.7
SOX11P35716 Y_RNA.238-201ENST00000364441 102 ntBASIC4.43□□□□□ -1.7
SOX11P35716 Y_RNA.272-201ENST00000364696 102 ntBASIC4.43□□□□□ -1.7
SOX11P35716 SNORA12-201ENST00000391162 147 ntBASIC4.43□□□□□ -1.7
SOX11P35716 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
SOX11P35716 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX11P35716 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX11P35716 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX11P35716 Y_RNA.637-201ENST00000459424 114 ntBASIC4.43□□□□□ -1.7
SOX11P35716 AC091179.1-201ENST00000461606 579 ntBASIC4.43□□□□□ -1.7
SOX11P35716 RN7SL132P-201ENST00000478131 296 ntBASIC4.43□□□□□ -1.7
SOX11P35716 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
SOX11P35716 SNORA31.21-201ENST00000517180 77 ntBASIC4.43□□□□□ -1.7
SOX11P35716 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX11P35716 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms