Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SNORD42.2-201ENST00000365570 69 ntBASIC3.07□□□□□ -1.92
CIITAP33076 RNU6-1227P-201ENST00000383981 107 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AL356057.2-201ENST00000403318 432 ntBASIC3.07□□□□□ -1.92
CIITAP33076 RNU6-370P-201ENST00000411008 104 ntBASIC3.07□□□□□ -1.92
CIITAP33076 NDUFS5P4-201ENST00000412983 318 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.07□□□□□ -1.92
CIITAP33076 AL139396.1-201ENST00000421137 167 ntBASIC3.07□□□□□ -1.92
CIITAP33076 PGBD4P6-201ENST00000421501 610 ntBASIC3.07□□□□□ -1.92
CIITAP33076 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.07□□□□□ -1.92
CIITAP33076 AC098614.2-201ENST00000426040 255 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AL627311.1-201ENST00000431514 115 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.07□□□□□ -1.92
CIITAP33076 SNAP23P1-201ENST00000433229 246 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.07□□□□□ -1.92
CIITAP33076 RPL21P2-201ENST00000440049 481 ntBASIC3.07□□□□□ -1.92
CIITAP33076 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AC108938.1-201ENST00000451204 136 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.07□□□□□ -1.92
CIITAP33076 RNU7-187P-201ENST00000458985 68 ntBASIC3.07□□□□□ -1.92
CIITAP33076 RAC1P5-201ENST00000512182 576 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.07□□□□□ -1.92
CIITAP33076 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.07□□□□□ -1.92
CIITAP33076 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
CIITAP33076 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.07□□□□□ -1.92
CIITAP33076 AC084781.2-201ENST00000615568 161 ntBASIC3.07□□□□□ -1.92
CIITAP33076 AC126177.8-201ENST00000618339 1015 ntBASIC3.07□□□□□ -1.92
CIITAP33076 Z69720.2-201ENST00000624755 279 ntBASIC3.07□□□□□ -1.92
CIITAP33076 MTND4P23-201ENST00000447723 1363 ntBASIC3.07□□□□□ -1.92
CIITAP33076 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.07□□□□□ -1.92
CIITAP33076 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CIITAP33076 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.07□□□□□ -1.92
CIITAP33076 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-37P-201ENST00000362692 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 Y_RNA.132-201ENST00000363421 102 ntBASIC3.06□□□□□ -1.92
CIITAP33076 SNORA5B-201ENST00000363786 132 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-11P-201ENST00000364234 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-25P-201ENST00000383873 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-1-201ENST00000383898 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 Y_RNA.431-201ENST00000384086 102 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-48P-201ENST00000384161 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-36P-201ENST00000384172 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-4P-201ENST00000384205 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-5P-201ENST00000384238 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-3P-201ENST00000384314 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-16P-201ENST00000384385 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-15P-201ENST00000384534 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-2-201ENST00000384627 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-29P-201ENST00000384637 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-9-201ENST00000384776 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-33P-201ENST00000384793 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNA5SP344-201ENST00000411081 104 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AL096701.2-201ENST00000416920 238 ntBASIC3.06□□□□□ -1.92
CIITAP33076 NUP35P1-201ENST00000422734 947 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AL358075.3-201ENST00000426289 226 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AC063976.3-201ENST00000426849 329 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AC236972.2-201ENST00000434979 310 ntBASIC3.06□□□□□ -1.92
CIITAP33076 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
CIITAP33076 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
CIITAP33076 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.06□□□□□ -1.92
CIITAP33076 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.06□□□□□ -1.92
CIITAP33076 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.06□□□□□ -1.92
CIITAP33076 AC026782.1-201ENST00000512952 449 ntBASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-1213P-201ENST00000517075 94 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.06□□□□□ -1.92
CIITAP33076 AC104576.1-201ENST00000524225 88 ntBASIC3.06□□□□□ -1.92
CIITAP33076 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.06□□□□□ -1.92
CIITAP33076 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.06□□□□□ -1.92
CIITAP33076 AC025281.1-201ENST00000567026 265 ntBASIC3.06□□□□□ -1.92
CIITAP33076 AC093249.1-201ENST00000567049 203 ntBASIC3.06□□□□□ -1.92
CIITAP33076 MIR4319-201ENST00000577285 85 ntBASIC3.06□□□□□ -1.92
CIITAP33076 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CIITAP33076 RNU6-6P-201ENST00000606623 107 ntBASIC3.06□□□□□ -1.92
CIITAP33076 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
CIITAP33076 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.06□□□□□ -1.92
CIITAP33076 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.06□□□□□ -1.92
CIITAP33076 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
CIITAP33076 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.05□□□□□ -1.92
CIITAP33076 RNU6-214P-201ENST00000384130 107 ntBASIC3.05□□□□□ -1.92
CIITAP33076 Y_RNA.473-201ENST00000384333 102 ntBASIC3.05□□□□□ -1.92
CIITAP33076 RNU6-601P-201ENST00000384540 107 ntBASIC3.05□□□□□ -1.92
CIITAP33076 MIR10A-201ENST00000385043 110 ntBASIC3.05□□□□□ -1.92
CIITAP33076 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CIITAP33076 AL356057.3-201ENST00000402607 340 ntBASIC3.05□□□□□ -1.92
CIITAP33076 RNA5SP184-201ENST00000411071 108 ntBASIC3.05□□□□□ -1.92
CIITAP33076 SNORD56-201ENST00000413522 71 ntBASIC3.05□□□□□ -1.92
CIITAP33076 RPL26P27-201ENST00000414397 437 ntBASIC3.05□□□□□ -1.92
CIITAP33076 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.05□□□□□ -1.92
CIITAP33076 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.05□□□□□ -1.92
CIITAP33076 AC016831.2-201ENST00000417179 352 ntBASIC3.05□□□□□ -1.92
CIITAP33076 UBE2V1P4-201ENST00000425374 344 ntBASIC3.05□□□□□ -1.92
CIITAP33076 AC236972.1-201ENST00000433225 199 ntBASIC3.05□□□□□ -1.92
CIITAP33076 AL645568.3-201ENST00000433683 316 ntBASIC3.05□□□□□ -1.92
CIITAP33076 AL078601.1-201ENST00000444542 271 ntBASIC3.05□□□□□ -1.92
CIITAP33076 MTCO3P10-201ENST00000455912 772 ntBASIC3.05□□□□□ -1.92
CIITAP33076 RPS27P26-201ENST00000494583 239 ntBASIC3.05□□□□□ -1.92
CIITAP33076 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.05□□□□□ -1.92
CIITAP33076 SEM1P1-201ENST00000506694 209 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms