Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MIR578-201ENST00000384828 96 ntBASIC3□□□□□ -1.93
HOXA11P31270 Y_RNA.646-201ENST00000410980 101 ntBASIC3□□□□□ -1.93
HOXA11P31270 CYCSP33-201ENST00000414485 327 ntBASIC3□□□□□ -1.93
HOXA11P31270 AC099548.1-201ENST00000421443 426 ntBASIC3□□□□□ -1.93
HOXA11P31270 AL513043.1-201ENST00000439124 535 ntBASIC3□□□□□ -1.93
HOXA11P31270 RNU6-1315P-201ENST00000517187 99 ntBASIC3□□□□□ -1.93
HOXA11P31270 RNA5SP380-201ENST00000517190 98 ntBASIC3□□□□□ -1.93
HOXA11P31270 RNU6-323P-201ENST00000521915 107 ntBASIC3□□□□□ -1.93
HOXA11P31270 AP003122.3-201ENST00000526316 255 ntBASIC3□□□□□ -1.93
HOXA11P31270 AC084851.1-201ENST00000529105 249 ntBASIC3□□□□□ -1.93
HOXA11P31270 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3□□□□□ -1.93
HOXA11P31270 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3□□□□□ -1.93
HOXA11P31270 MIR1273C-201ENST00000578669 77 ntBASIC3□□□□□ -1.93
HOXA11P31270 MIR548AC-201ENST00000585049 88 ntBASIC3□□□□□ -1.93
HOXA11P31270 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3□□□□□ -1.93
HOXA11P31270 AL161798.1-201ENST00000604630 131 ntBASIC3□□□□□ -1.93
HOXA11P31270 AP000942.4-201ENST00000604811 241 ntBASIC3□□□□□ -1.93
HOXA11P31270 AC019193.3-201ENST00000609144 554 ntBASIC3□□□□□ -1.93
HOXA11P31270 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA11P31270 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA11P31270 UBE2L2-201ENST00000254302 429 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 SNORD62.1-201ENST00000362541 86 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 RNU6-270P-201ENST00000364131 105 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 Y_RNA.252-201ENST00000364556 101 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC117470.1-201ENST00000381974 330 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 SNORA75.6-201ENST00000391318 127 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 RPS4XP7-201ENST00000406274 780 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 RPL21P90-201ENST00000415692 466 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AL590632.1-201ENST00000424289 371 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 MYL8P-204ENST00000431574 518 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC112220.1-201ENST00000434628 355 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 FABP5P15-201ENST00000453566 214 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC003982.1-202ENST00000469928 248 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC090525.1-201ENST00000479116 478 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC022493.1-201ENST00000492984 337 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 SEM1P1-201ENST00000506694 209 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 TBCAP3-201ENST00000512475 312 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 RNU6-1332P-201ENST00000516666 104 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 RNA5SP471-201ENST00000516971 106 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.99□□□□□ -1.93
HOXA11P31270 ATP5F1P5-201ENST00000526403 760 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA11P31270 AC026371.1-201ENST00000551867 419 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA11P31270 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC098826.3-201ENST00000603823 466 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC002044.1-201ENST00000606707 158 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC040896.1-201ENST00000613819 479 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AL031601.2-202ENST00000622650 282 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 AC091925.1-201ENST00000623204 462 ntBASIC2.99□□□□□ -1.93
HOXA11P31270 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HOXA11P31270 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA11P31270 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA11P31270 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA11P31270 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA11P31270 AL136360.1-201ENST00000503377 1900 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 RNU6-1167P-201ENST00000363227 94 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 RNU6-1303P-201ENST00000364841 107 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 RNU6-639P-201ENST00000384074 107 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 RNU6-214P-201ENST00000384130 107 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 MIR181A2-201ENST00000384863 110 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 MIR34A-201ENST00000385130 110 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL356057.3-201ENST00000402607 340 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA11P31270 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL365496.1-201ENST00000426885 215 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA11P31270 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL714022.1-201ENST00000439897 151 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 Z82210.1-201ENST00000440037 231 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL035666.1-201ENST00000446195 348 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 NDUFB1P2-201ENST00000449477 176 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA11P31270 AL135752.1-201ENST00000479477 471 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 RPS15AP34-201ENST00000487776 387 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AC096745.1-201ENST00000509945 370 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AC092436.3-201ENST00000511788 257 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 Y_RNA.708-201ENST00000516950 96 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AC069113.1-201ENST00000517763 267 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA11P31270 AC136443.5-201ENST00000603741 370 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AC016925.2-201ENST00000605108 242 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 AL161423.1-201ENST00000613700 262 ntBASIC2.98□□□□□ -1.93
HOXA11P31270 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA11P31270 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HOXA11P31270 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA11P31270 MTND5P30-201ENST00000452896 1731 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AL359693.1-201ENST00000614959 2407 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 RNU6-1329P-201ENST00000365664 107 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXA11P31270 SNORA75B-201ENST00000384053 137 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 MIR301A-201ENST00000385261 86 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 RNU2-25P-201ENST00000411041 191 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms