Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
ABCD3P28288 MTND4P23-201ENST00000447723 1363 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
ABCD3P28288 AC108206.1-201ENST00000570186 4159 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 Y_RNA.40-201ENST00000362645 93 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 RNU6-1013P-201ENST00000384180 107 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 NDUFB4P4-201ENST00000404822 243 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ABCD3P28288 AC096664.2-201ENST00000411843 406 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AP000275.1-201ENST00000411943 390 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 EEF1A1P41-201ENST00000414667 207 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AIMP1P2-201ENST00000425294 312 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AL645568.3-201ENST00000433683 316 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.69□□□□□ -1.98
ABCD3P28288 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.69□□□□□ -1.98
ABCD3P28288 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.69□□□□□ -1.98
ABCD3P28288 RPL31P58-201ENST00000469001 379 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.69□□□□□ -1.98
ABCD3P28288 RPL30P1-201ENST00000488676 339 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 MTCO1P29-201ENST00000496868 288 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AC022447.4-201ENST00000504053 364 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.69□□□□□ -1.98
ABCD3P28288 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 SCARNA13-201ENST00000516672 275 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 RN7SKP256-201ENST00000517201 314 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AL670379.2-201ENST00000604983 252 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.69□□□□□ -1.98
ABCD3P28288 AC068944.2-201ENST00000610373 403 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
ABCD3P28288 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.69□□□□□ -1.98
ABCD3P28288 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
ABCD3P28288 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
ABCD3P28288 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
ABCD3P28288 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ABCD3P28288 RNU6-1285P-201ENST00000363480 105 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 RNU6-43P-201ENST00000384302 107 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 RN7SKP61-201ENST00000410642 295 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.68□□□□□ -1.98
ABCD3P28288 AL139132.1-201ENST00000431587 344 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.68□□□□□ -1.98
ABCD3P28288 RPL39P40-201ENST00000445481 146 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 RNU7-26P-201ENST00000458980 63 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 RPS29P26-201ENST00000477483 171 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC069439.1-201ENST00000494739 167 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.68□□□□□ -1.98
ABCD3P28288 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.68□□□□□ -1.98
ABCD3P28288 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
ABCD3P28288 AC096745.1-201ENST00000509945 370 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.68□□□□□ -1.98
ABCD3P28288 AP000889.2-201ENST00000532684 490 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 TRAV32-201ENST00000553993 340 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC023043.2-201ENST00000589678 1026 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AL713866.2-201ENST00000603579 219 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AL138963.2-201ENST00000605137 226 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC135507.2-201ENST00000612443 309 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AL138726.1-201ENST00000614873 333 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AC009233.1-201ENST00000616477 371 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 AL136221.1-201ENST00000621449 509 ntBASIC2.68□□□□□ -1.98
ABCD3P28288 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.68□□□□□ -1.98
ABCD3P28288 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.68□□□□□ -1.98
ABCD3P28288 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ABCD3P28288 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
ABCD3P28288 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ABCD3P28288 AC096644.4-201ENST00000563417 2912 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 Y_RNA.72-201ENST00000362894 103 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 Y_RNA.86-201ENST00000363020 111 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RNU6-1252P-201ENST00000363054 104 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 Y_RNA.135-201ENST00000363439 95 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 Y_RNA.212-201ENST00000364177 102 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 SNORD32A-201ENST00000364805 84 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 MIR95-201ENST00000385072 81 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RNU6-510P-201ENST00000391239 108 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 UBA52P6-201ENST00000399822 382 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RPL19P1-201ENST00000411635 428 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RPL23AP95-201ENST00000426806 265 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AC078809.1-201ENST00000427601 140 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AC236972.1-201ENST00000433225 199 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.67□□□□□ -1.98
ABCD3P28288 MTND4LP16-201ENST00000440828 295 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AL161788.1-201ENST00000441805 169 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RPL9P9-202ENST00000466501 579 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AC090096.1-201ENST00000489168 390 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AF213884.2-201ENST00000510417 903 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RNU6-864P-201ENST00000516256 108 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 RNU6-612P-201ENST00000516909 102 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
ABCD3P28288 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.67□□□□□ -1.98
ABCD3P28288 IMMP1LP2-201ENST00000552954 492 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 AC093249.1-201ENST00000567049 203 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 MTCO3P13-201ENST00000577757 781 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 MIR3136-201ENST00000583498 78 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 U4atac.1-201ENST00000618345 95 ntBASIC2.67□□□□□ -1.98
ABCD3P28288 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.67□□□□□ -1.98
ABCD3P28288 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.66□□□□□ -1.98
ABCD3P28288 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 464 ms