Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 7SK.10-201ENST00000621414 298 ntBASIC-0.76□□□□□ -2.53
TOP2AP11388 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.76□□□□□ -2.53
TOP2AP11388 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
TOP2AP11388 SNORD75.1-201ENST00000408373 60 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 SEPT7P5-201ENST00000434048 306 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 SEPT7P4-201ENST00000437076 306 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 RNU2-12P-201ENST00000517216 168 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.77□□□□□ -2.53
TOP2AP11388 ZNF705CP-201ENST00000530515 889 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 AL391813.1-201ENST00000603098 260 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 AC097065.2-201ENST00000608159 533 ntBASIC-0.77□□□□□ -2.53
TOP2AP11388 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.77□□□□□ -2.53
TOP2AP11388 MTND5P32-201ENST00000560711 1802 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 AC092268.1-201ENST00000342691 405 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.78□□□□□ -2.53
TOP2AP11388 MIR325-201ENST00000385260 98 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 SSR1P1-201ENST00000407630 814 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 AC016909.1-201ENST00000415916 166 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 AL512844.2-201ENST00000433990 593 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.78□□□□□ -2.53
TOP2AP11388 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC-0.78□□□□□ -2.53
TOP2AP11388 AL031176.1-201ENST00000604554 466 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 AC117490.2-201ENST00000610042 594 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 AC130324.3-201ENST00000614165 542 ntBASIC-0.78□□□□□ -2.53
TOP2AP11388 DBF4P1-201ENST00000412976 1892 ntBASIC-0.78□□□□□ -2.54
TOP2AP11388 RNU6-969P-201ENST00000383900 105 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 MIR145-201ENST00000384967 88 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 RNA5SP109-201ENST00000391010 116 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 FABP5P4-201ENST00000437203 171 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.79□□□□□ -2.54
TOP2AP11388 AC114981.1-201ENST00000503897 678 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.79□□□□□ -2.54
TOP2AP11388 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 AC006157.1-201ENST00000611750 366 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 AL078595.3-201ENST00000623815 1166 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 SNORD114-12-201ENST00000365400 75 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 MED13P1-201ENST00000428342 171 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 AC093422.3-201ENST00000428506 305 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 AL049734.2-201ENST00000441066 616 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.79□□□□□ -2.54
TOP2AP11388 AC016256.1-201ENST00000547971 354 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.79□□□□□ -2.54
TOP2AP11388 SNRPGP20-201ENST00000604477 205 ntBASIC-0.79□□□□□ -2.54
TOP2AP11388 SNORA18.1-201ENST00000363418 128 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 MIR610-201ENST00000385139 96 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 MIR1262-201ENST00000408276 93 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.8□□□□□ -2.54
TOP2AP11388 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.8□□□□□ -2.54
TOP2AP11388 AC244098.3-201ENST00000424803 96 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.8□□□□□ -2.54
TOP2AP11388 AC005094.1-201ENST00000440420 368 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 SNORD126-201ENST00000459475 77 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.8□□□□□ -2.54
TOP2AP11388 AC067904.2-201ENST00000517322 1283 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 AC007363.1-201ENST00000604736 620 ntBASIC-0.8□□□□□ -2.54
TOP2AP11388 RNY1P8-201ENST00000383970 114 ntBASIC-0.81□□□□□ -2.54
TOP2AP11388 RNU6-929P-201ENST00000384429 107 ntBASIC-0.81□□□□□ -2.54
TOP2AP11388 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.81□□□□□ -2.54
TOP2AP11388 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.81□□□□□ -2.54
TOP2AP11388 RNU6-165P-201ENST00000517170 99 ntBASIC-0.81□□□□□ -2.54
TOP2AP11388 AC022861.1-201ENST00000522981 663 ntBASIC-0.81□□□□□ -2.54
TOP2AP11388 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.81□□□□□ -2.54
TOP2AP11388 AL157786.1-207ENST00000627771 695 ntBASIC-0.81□□□□□ -2.54
TOP2AP11388 RNU6-989P-201ENST00000362756 107 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 MIR140-201ENST00000385282 100 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.82□□□□□ -2.54
TOP2AP11388 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.82□□□□□ -2.54
TOP2AP11388 MTCO3P2-201ENST00000457365 171 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 AC016925.1-201ENST00000458303 298 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 snoU13.21-201ENST00000459368 105 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 MEMO1P3-201ENST00000459811 302 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 SNORA31.2-201ENST00000516019 134 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 IGKV1-22-201ENST00000524313 326 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.82□□□□□ -2.54
TOP2AP11388 AC087685.1-201ENST00000587507 141 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 AC013468.1-201ENST00000608680 598 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 AC040168.1-201ENST00000623594 991 ntBASIC-0.82□□□□□ -2.54
TOP2AP11388 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.82□□□□□ -2.54
TOP2AP11388 MIR196A2-201ENST00000385189 110 ntBASIC-0.83□□□□□ -2.54
TOP2AP11388 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC-0.83□□□□□ -2.54
TOP2AP11388 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.83□□□□□ -2.54
TOP2AP11388 AC104982.1-201ENST00000478775 574 ntBASIC-0.83□□□□□ -2.54
TOP2AP11388 AC009712.1-201ENST00000564938 316 ntBASIC-0.83□□□□□ -2.54
TOP2AP11388 MIR3921-201ENST00000577308 85 ntBASIC-0.83□□□□□ -2.54
TOP2AP11388 AC011195.1-201ENST00000578177 177 ntBASIC-0.83□□□□□ -2.54
TOP2AP11388 AC005176.2-201ENST00000596933 147 ntBASIC-0.83□□□□□ -2.54
TOP2AP11388 SNORD115-24-201ENST00000363528 82 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 SNORD14D-201ENST00000384390 87 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AL591034.2-201ENST00000402839 359 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.84□□□□□ -2.54
TOP2AP11388 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.84□□□□□ -2.54
TOP2AP11388 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
TOP2AP11388 RPL22P13-201ENST00000493291 347 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 RNU6-667P-201ENST00000517186 102 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC092325.1-201ENST00000566449 554 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AP005229.2-201ENST00000609980 697 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AL591926.4-201ENST00000616895 298 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms