Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-884P-201ENST00000363889 107 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 MIR199A2-201ENST00000385289 110 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 SNORD78.2-201ENST00000391076 69 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 HSPE1P26-201ENST00000405341 275 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 CYCSP32-201ENST00000440548 321 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 BX510359.1-201ENST00000456973 237 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 AC006517.1-201ENST00000480485 328 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 Y_RNA.706-201ENST00000516933 99 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 AC011471.1-201ENST00000585766 187 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 RPL23AP78-201ENST00000599928 470 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 AC048347.1-201ENST00000624621 427 ntBASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.06□□□□□ -1.6
CSB-PGBD3P0DP91 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-1301P-201ENST00000362724 104 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-336P-201ENST00000364891 107 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 MIR490-201ENST00000384865 128 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 MIR888-201ENST00000401186 77 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 NDUFB4P4-201ENST00000404822 243 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 AL358453.1-201ENST00000422522 250 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 AC084357.1-201ENST00000473404 255 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 AC074133.1-201ENST00000515696 183 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 RNU1-61P-201ENST00000516107 151 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 MIR2355-201ENST00000517199 87 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 IGLV3-26-201ENST00000520756 302 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 SRP72P2-201ENST00000344851 1979 ntBASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.05□□□□□ -1.6
CSB-PGBD3P0DP91 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RNA5SP50-201ENST00000363731 107 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-923P-201ENST00000364753 107 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RNA5SP267-201ENST00000364893 126 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-898P-201ENST00000365627 104 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 SNORD63-201ENST00000384262 68 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-1035P-201ENST00000384477 107 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RNA5SP310-201ENST00000459084 116 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 TOMM22P6-201ENST00000465035 409 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 AP004607.1-201ENST00000524456 203 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 AC107016.1-201ENST00000550463 337 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 MIR4282-201ENST00000583613 67 ntBASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CSB-PGBD3P0DP91 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-326P-201ENST00000365480 107 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 MIR518D-201ENST00000385014 87 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 SNORA53-201ENST00000391141 249 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU4-30P-201ENST00000410245 143 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU2-37P-201ENST00000410695 177 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RPL21P40-201ENST00000428586 483 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 Z82188.1-201ENST00000436709 154 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AC006026.2-201ENST00000457376 180 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RN7SL585P-201ENST00000470538 280 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RPS26P21-201ENST00000475397 348 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AL049830.2-201ENST00000480072 201 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU7-175P-201ENST00000515915 61 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-1219P-201ENST00000516143 112 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNY3P16-201ENST00000516338 101 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-479P-201ENST00000516348 105 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU6-928P-201ENST00000516876 104 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU2-31P-201ENST00000516954 155 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AC090617.3-201ENST00000573670 475 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AC005000.2-201ENST00000605468 310 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 RNU1-30P-201ENST00000606575 163 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AL773545.4-201ENST00000637262 310 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 AL513478.4-201ENST00000641636 310 ntBASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CSB-PGBD3P0DP91 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms