Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 HMGN2P9-201ENST00000476875 229 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 MTND2P33-201ENST00000506452 1031 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 SUMO2P5-201ENST00000506790 245 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 AC005741.1-201ENST00000511094 432 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 RNU5A-4P-201ENST00000516588 111 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 SUMO2P18-201ENST00000518873 252 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 CBX3P8-201ENST00000532412 525 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 AL353778.1-201ENST00000603149 408 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 AC104985.3-201ENST00000623479 597 ntBASIC0.58□□□□□ -2.32
CXCL1P09341 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CXCL1P09341 OR4G2P-201ENST00000328113 903 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 RNU6-1019P-201ENST00000364424 107 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 AL603865.2-201ENST00000401679 213 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 USP9YP33-201ENST00000412220 421 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 AC108667.1-201ENST00000428618 249 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 TXNL1P1-201ENST00000429528 554 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.57□□□□□ -2.32
CXCL1P09341 EEF1E1P1-201ENST00000446998 430 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 MTND1P16-201ENST00000465177 898 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 RN7SL429P-201ENST00000479090 223 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 RN7SL489P-201ENST00000486185 223 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 RN7SL327P-201ENST00000488659 223 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.57□□□□□ -2.32
CXCL1P09341 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.57□□□□□ -2.32
CXCL1P09341 AC108210.2-201ENST00000503681 201 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.57□□□□□ -2.32
CXCL1P09341 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.57□□□□□ -2.32
CXCL1P09341 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.57□□□□□ -2.32
CXCL1P09341 ACA64.5-201ENST00000516207 127 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 RNA5SP503-201ENST00000517047 117 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.57□□□□□ -2.32
CXCL1P09341 AC091135.1-201ENST00000585943 307 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CXCL1P09341 AL138889.2-201ENST00000603883 242 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 AC130324.3-201ENST00000614165 542 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 RN7SL853P-201ENST00000617250 223 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 MIR6866-201ENST00000638146 69 ntBASIC0.57□□□□□ -2.32
CXCL1P09341 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CXCL1P09341 RNU2-7P-201ENST00000410794 178 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AL606490.4-201ENST00000423117 127 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.56□□□□□ -2.32
CXCL1P09341 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.56□□□□□ -2.32
CXCL1P09341 AL139824.2-201ENST00000458731 1095 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AC145146.1-201ENST00000496370 254 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 TRBVA-201ENST00000498804 316 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 SNORA31.16-201ENST00000516773 139 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.56□□□□□ -2.32
CXCL1P09341 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.56□□□□□ -2.32
CXCL1P09341 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.56□□□□□ -2.32
CXCL1P09341 MTCO2P2-201ENST00000591258 225 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AL365434.2-201ENST00000607979 234 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AL355816.2-201ENST00000610049 647 ntBASIC0.56□□□□□ -2.32
CXCL1P09341 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.56□□□□□ -2.32
CXCL1P09341 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.55□□□□□ -2.32
CXCL1P09341 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.55□□□□□ -2.32
CXCL1P09341 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.55□□□□□ -2.32
CXCL1P09341 MTCO2P1-201ENST00000424648 477 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 AC099677.2-201ENST00000436385 175 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 snoU13.23-201ENST00000458863 104 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 snoU109.2-201ENST00000459316 135 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.55□□□□□ -2.32
CXCL1P09341 SNORA43.2-201ENST00000516652 128 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
CXCL1P09341 AC136628.3-201ENST00000521868 290 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
CXCL1P09341 MIR4698-201ENST00000577795 80 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.55□□□□□ -2.32
CXCL1P09341 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CXCL1P09341 AC018889.1-201ENST00000605372 397 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 RNU6-87P-201ENST00000607561 108 ntBASIC0.55□□□□□ -2.32
CXCL1P09341 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
CXCL1P09341 MIR378A-201ENST00000362177 66 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 SMIM11P1-201ENST00000369586 178 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 MIR320C1-201ENST00000408566 88 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.54□□□□□ -2.32
CXCL1P09341 USP9YP21-201ENST00000420603 432 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.54□□□□□ -2.32
CXCL1P09341 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.54□□□□□ -2.32
CXCL1P09341 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.54□□□□□ -2.32
CXCL1P09341 PSMC1P5-201ENST00000512850 177 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 RNU6-1028P-201ENST00000517164 93 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.54□□□□□ -2.32
CXCL1P09341 OR8K2P-201ENST00000524645 927 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.54□□□□□ -2.32
CXCL1P09341 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC008088.1-201ENST00000580993 280 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 VN1R80P-201ENST00000597126 338 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.54□□□□□ -2.32
CXCL1P09341 AL590229.1-201ENST00000603497 542 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC107304.1-201ENST00000604229 296 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AP002802.2-201ENST00000605877 235 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 MIR15A-201ENST00000607334 83 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC092574.1-201ENST00000609771 420 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 AC108706.1-201ENST00000611053 297 ntBASIC0.54□□□□□ -2.32
CXCL1P09341 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms