Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC008945.2-201ENST00000606056 604 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AL132822.1-201ENST00000617063 513 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 AC126177.8-201ENST00000618339 1015 ntBASIC0.76□□□□□ -2.29
COL1A1P02452 RNU6-414P-201ENST00000363705 104 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
COL1A1P02452 AL133475.1-201ENST00000404414 305 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.75□□□□□ -2.29
COL1A1P02452 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.75□□□□□ -2.29
COL1A1P02452 AC092628.1-201ENST00000436250 252 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 SNRPEP7-201ENST00000438350 220 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 PAXBP1P1-201ENST00000449315 447 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 RPL7P43-201ENST00000478876 753 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.75□□□□□ -2.29
COL1A1P02452 AC023194.1-201ENST00000493084 308 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 RNU6-150P-201ENST00000516237 95 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.75□□□□□ -2.29
COL1A1P02452 COPS8P3-201ENST00000526024 482 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 AP000763.2-201ENST00000540641 163 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 AC023158.2-201ENST00000614876 543 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 AC013470.4-201ENST00000619978 986 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 AC068880.4-201ENST00000623082 495 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 AC067863.3-201ENST00000624172 122 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 PCMTD1P7-201ENST00000634506 357 ntBASIC0.75□□□□□ -2.29
COL1A1P02452 SNORD33-201ENST00000362761 85 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 RNU6-188P-201ENST00000364207 107 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 snoZ40.1-201ENST00000364540 72 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 RNU6-439P-201ENST00000384188 106 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL1A1P02452 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL1A1P02452 RNA5SP511-201ENST00000410487 115 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AC138623.1-201ENST00000418060 216 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.74□□□□□ -2.29
COL1A1P02452 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.74□□□□□ -2.29
COL1A1P02452 MTND5P15-201ENST00000434246 349 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.74□□□□□ -2.29
COL1A1P02452 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.74□□□□□ -2.29
COL1A1P02452 AC012308.1-201ENST00000451232 178 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 RPL39P36-201ENST00000490784 156 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AC079140.2-201ENST00000506193 142 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.74□□□□□ -2.29
COL1A1P02452 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.74□□□□□ -2.29
COL1A1P02452 SNORA31.3-201ENST00000516029 96 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AP003049.1-201ENST00000529418 457 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.74□□□□□ -2.29
COL1A1P02452 AL133153.1-201ENST00000557756 303 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 SNORA77B-201ENST00000578179 125 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AP001981.2-201ENST00000603241 418 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 DPPA3P3-201ENST00000603842 430 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 AL133445.2-201ENST00000611191 527 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.74□□□□□ -2.29
COL1A1P02452 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.74□□□□□ -2.29
COL1A1P02452 AC008993.2-201ENST00000631744 806 ntBASIC0.74□□□□□ -2.29
COL1A1P02452 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL1A1P02452 RNU6-289P-201ENST00000364093 107 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNA5SP331-201ENST00000364986 107 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNU6-898P-201ENST00000365627 104 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 Y_RNA.408-201ENST00000383987 102 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNU6-1222P-201ENST00000384615 107 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 MIR515-2-201ENST00000384883 83 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 MIR515-1-201ENST00000384884 83 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 MIR1267-201ENST00000408723 78 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.73□□□□□ -2.29
COL1A1P02452 MTCO3P5-201ENST00000433620 714 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.73□□□□□ -2.29
COL1A1P02452 MTND4P25-201ENST00000441039 533 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.73□□□□□ -2.29
COL1A1P02452 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.73□□□□□ -2.29
COL1A1P02452 HMGN1P13-201ENST00000505795 138 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 MTCYBP43-201ENST00000513621 740 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNU6-572P-201ENST00000516724 80 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 SNORA31.17-201ENST00000516953 127 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNA5SP404-201ENST00000517118 132 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC087894.1-201ENST00000538359 518 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 CLIC4P2-201ENST00000601934 717 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC021171.1-201ENST00000603137 706 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RPL21P136-201ENST00000605378 396 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC112204.3-201ENST00000623822 332 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC091948.2-201ENST00000636510 279 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.73□□□□□ -2.29
COL1A1P02452 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
COL1A1P02452 MTND4P3-201ENST00000417829 541 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.73□□□□□ -2.29
COL1A1P02452 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.73□□□□□ -2.29
COL1A1P02452 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.73□□□□□ -2.29
COL1A1P02452 UBL5P1-201ENST00000507979 193 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNVU1-2-201ENST00000516326 135 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNU7-40P-201ENST00000516397 64 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.73□□□□□ -2.29
COL1A1P02452 AC090115.3-201ENST00000553218 849 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.73□□□□□ -2.29
COL1A1P02452 VN1R83P-201ENST00000595685 445 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 BNIP3P27-201ENST00000599991 412 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 BNIP3P26-201ENST00000600827 554 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC005776.1-201ENST00000603164 290 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AP002802.2-201ENST00000605877 235 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC090186.1-201ENST00000605991 572 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 AC104985.3-201ENST00000623479 597 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms