Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.51□□□□□ -2.01
CLPTM1O96005 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.51□□□□□ -2.01
CLPTM1O96005 MIR4790-201ENST00000577799 79 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC011471.1-201ENST00000585766 187 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.51□□□□□ -2.01
CLPTM1O96005 AC008121.1-201ENST00000603244 268 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 C8orf59P2-201ENST00000603441 271 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 ELOCP5-201ENST00000604924 333 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AL022345.1-201ENST00000607292 135 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC093732.2-201ENST00000607950 274 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.51□□□□□ -2.01
CLPTM1O96005 MIR1302-1-201ENST00000637932 143 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 AL365361.1-201ENST00000566942 3481 ntBASIC2.51□□□□□ -2.01
CLPTM1O96005 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLPTM1O96005 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CLPTM1O96005 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.5□□□□□ -2.01
CLPTM1O96005 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CLPTM1O96005 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLPTM1O96005 RNU6-461P-201ENST00000364195 107 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.5□□□□□ -2.01
CLPTM1O96005 BPY2DP-201ENST00000422208 265 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AL714022.1-201ENST00000439897 151 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AL445687.1-201ENST00000439946 251 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AL031274.1-201ENST00000450334 232 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 BTF3P15-201ENST00000455606 336 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AC128713.1-201ENST00000471495 306 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.5□□□□□ -2.01
CLPTM1O96005 RNU6-277P-201ENST00000516272 106 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 Y_RNA.691-201ENST00000516611 103 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 RNU6-566P-201ENST00000516790 107 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.5□□□□□ -2.01
CLPTM1O96005 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.5□□□□□ -2.01
CLPTM1O96005 AC011890.2-201ENST00000613393 294 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AL359314.1-201ENST00000616913 261 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AC006386.2-201ENST00000624491 75 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AC012005.1-201ENST00000624575 75 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 Z69720.2-201ENST00000624755 279 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 AL359697.1-201ENST00000624879 587 ntBASIC2.5□□□□□ -2.01
CLPTM1O96005 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
CLPTM1O96005 MTND4P29-201ENST00000503122 1372 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.49□□□□□ -2.01
CLPTM1O96005 AC110491.1-201ENST00000562191 2010 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 RNU6-562P-201ENST00000362731 107 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 Y_RNA.61-201ENST00000362835 102 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 U8.8-201ENST00000365399 135 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLPTM1O96005 SNORD116-11-201ENST00000383882 92 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 RNU6-72P-201ENST00000384285 79 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 Y_RNA.474-201ENST00000384341 102 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 MT-TD-201ENST00000387419 68 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 NDUFB4P4-201ENST00000404822 243 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 RNU2-49P-201ENST00000410666 184 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.49□□□□□ -2.01
CLPTM1O96005 AC009414.1-201ENST00000427200 443 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AL139132.1-201ENST00000431587 344 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.49□□□□□ -2.01
CLPTM1O96005 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.49□□□□□ -2.01
CLPTM1O96005 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.49□□□□□ -2.01
CLPTM1O96005 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.49□□□□□ -2.01
CLPTM1O96005 AC011753.1-201ENST00000451001 220 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.49□□□□□ -2.01
CLPTM1O96005 RPL23AP45-201ENST00000476406 468 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.49□□□□□ -2.01
CLPTM1O96005 AC092436.3-201ENST00000511788 257 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 Y_RNA.675-201ENST00000516389 149 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 RNA5SP82-201ENST00000516707 92 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 PRELID2P1-201ENST00000552837 301 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.49□□□□□ -2.01
CLPTM1O96005 MIR4795-201ENST00000584182 89 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AL121917.1-203ENST00000605534 577 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AC087045.1-201ENST00000605856 382 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AC064836.2-201ENST00000609491 462 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.49□□□□□ -2.01
CLPTM1O96005 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.49□□□□□ -2.01
CLPTM1O96005 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.49□□□□□ -2.01
CLPTM1O96005 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CLPTM1O96005 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
CLPTM1O96005 RNU6-1329P-201ENST00000365664 107 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLPTM1O96005 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.48□□□□□ -2.01
CLPTM1O96005 RNU6-128P-201ENST00000383976 107 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 RNU6-214P-201ENST00000384130 107 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AL445529.1-201ENST00000398713 389 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 MIR548K-201ENST00000408406 116 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 RNU4-14P-201ENST00000410858 122 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 SNORD56-201ENST00000413522 71 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
CLPTM1O96005 COTL1P1-201ENST00000422309 375 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 RPS3AP52-201ENST00000435639 297 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC025750.2-201ENST00000442609 450 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.48□□□□□ -2.01
CLPTM1O96005 AC130509.1-201ENST00000464158 433 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 MRPL42P6-201ENST00000486397 371 ntBASIC2.48□□□□□ -2.01
CLPTM1O96005 AC083906.5-201ENST00000503722 328 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms