Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 POLHP1-201ENST00000411806 470 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MBD3O95983 CBX3P6-201ENST00000430257 527 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AL591043.1-201ENST00000432461 424 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
MBD3O95983 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.92□□□□□ -2.1
MBD3O95983 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD3O95983 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD3O95983 MTND3P7-201ENST00000474435 343 ntBASIC1.92□□□□□ -2.1
MBD3O95983 RNA5SP503-201ENST00000517047 117 ntBASIC1.92□□□□□ -2.1
MBD3O95983 RNU6-667P-201ENST00000517186 102 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD3O95983 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.92□□□□□ -2.1
MBD3O95983 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.92□□□□□ -2.1
MBD3O95983 AC115990.1-201ENST00000526957 301 ntBASIC1.92□□□□□ -2.1
MBD3O95983 DUXAP5-201ENST00000529668 529 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD3O95983 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD3O95983 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AC091135.1-201ENST00000585943 307 ntBASIC1.92□□□□□ -2.1
MBD3O95983 VN1R107P-201ENST00000601784 209 ntBASIC1.92□□□□□ -2.1
MBD3O95983 SEPT7P9-203ENST00000604116 343 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AL670379.2-201ENST00000604983 252 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AC068944.2-201ENST00000610373 403 ntBASIC1.92□□□□□ -2.1
MBD3O95983 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
MBD3O95983 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
MBD3O95983 AC072046.2-201ENST00000618366 268 ntBASIC1.92□□□□□ -2.1
MBD3O95983 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.92□□□□□ -2.1
MBD3O95983 AP006437.1-201ENST00000641440 3685 ntBASIC1.91□□□□□ -2.1
MBD3O95983 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
MBD3O95983 MIR449A-201ENST00000362113 91 ntBASIC1.91□□□□□ -2.1
MBD3O95983 U3.4-201ENST00000363352 213 ntBASIC1.91□□□□□ -2.1
MBD3O95983 Y_RNA.169-201ENST00000363745 96 ntBASIC1.91□□□□□ -2.1
MBD3O95983 RNU6-715P-201ENST00000365204 103 ntBASIC1.91□□□□□ -2.1
MBD3O95983 MIR1-2-201ENST00000384961 85 ntBASIC1.91□□□□□ -2.1
MBD3O95983 RNA5SP425-201ENST00000410336 112 ntBASIC1.91□□□□□ -2.1
MBD3O95983 RN7SKP223-201ENST00000410582 62 ntBASIC1.91□□□□□ -2.1
MBD3O95983 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.91□□□□□ -2.1
MBD3O95983 DPH3P2-201ENST00000422618 250 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.91□□□□□ -2.1
MBD3O95983 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
MBD3O95983 DNAJC19P4-201ENST00000440115 345 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.91□□□□□ -2.1
MBD3O95983 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AC079448.1-201ENST00000449377 373 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.91□□□□□ -2.1
MBD3O95983 AC006512.1-201ENST00000468816 291 ntBASIC1.91□□□□□ -2.1
MBD3O95983 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AP002453.2-201ENST00000533503 320 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.91□□□□□ -2.1
MBD3O95983 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.91□□□□□ -2.1
MBD3O95983 MTCO3P23-201ENST00000561363 289 ntBASIC1.91□□□□□ -2.1
MBD3O95983 MIR4672-201ENST00000583126 81 ntBASIC1.91□□□□□ -2.1
MBD3O95983 CLIC4P2-201ENST00000601934 717 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AC068790.2-201ENST00000602601 557 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AC078795.2-201ENST00000602835 1252 ntBASIC1.91□□□□□ -2.1
MBD3O95983 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.91□□□□□ -2.1
MBD3O95983 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.91□□□□□ -2.1
MBD3O95983 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
MBD3O95983 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.9□□□□□ -2.1
MBD3O95983 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.9□□□□□ -2.11
MBD3O95983 RNU6-212P-201ENST00000362642 104 ntBASIC1.9□□□□□ -2.11
MBD3O95983 RNU6-181P-201ENST00000363225 107 ntBASIC1.9□□□□□ -2.11
MBD3O95983 RNU6-1029P-201ENST00000384109 107 ntBASIC1.9□□□□□ -2.11
MBD3O95983 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
MBD3O95983 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.9□□□□□ -2.11
MBD3O95983 AL353689.1-201ENST00000438895 199 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.9□□□□□ -2.11
MBD3O95983 RPL39P29-201ENST00000447779 157 ntBASIC1.9□□□□□ -2.11
MBD3O95983 MTND1P18-201ENST00000448191 573 ntBASIC1.9□□□□□ -2.11
MBD3O95983 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.9□□□□□ -2.11
MBD3O95983 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.9□□□□□ -2.11
MBD3O95983 AC022447.4-201ENST00000504053 364 ntBASIC1.9□□□□□ -2.11
MBD3O95983 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
MBD3O95983 RPL23AP94-201ENST00000512518 302 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC105417.1-201ENST00000514691 285 ntBASIC1.9□□□□□ -2.11
MBD3O95983 RNU6-445P-201ENST00000516949 107 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.9□□□□□ -2.11
MBD3O95983 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.9□□□□□ -2.11
MBD3O95983 CYCSP27-201ENST00000527643 293 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.9□□□□□ -2.11
MBD3O95983 MIR4703-201ENST00000577728 79 ntBASIC1.9□□□□□ -2.11
MBD3O95983 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC005034.5-201ENST00000604219 466 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AP001596.2-201ENST00000608410 312 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC091834.1-201ENST00000614543 472 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC099842.1-201ENST00000619919 596 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AP000770.2-201ENST00000623694 100 ntBASIC1.9□□□□□ -2.11
MBD3O95983 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MBD3O95983 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
MBD3O95983 RNU6-1285P-201ENST00000363480 105 ntBASIC1.89□□□□□ -2.11
MBD3O95983 RNU6-105P-201ENST00000363909 104 ntBASIC1.89□□□□□ -2.11
MBD3O95983 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
MBD3O95983 RNU6-434P-201ENST00000384376 107 ntBASIC1.89□□□□□ -2.11
MBD3O95983 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
MBD3O95983 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms