Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL445584.1-201ENST00000431451 330 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.56□□□□□ -1.84
CNOT4O95628 AL392103.1-201ENST00000447000 198 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 U8.22-201ENST00000459141 133 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.56□□□□□ -1.84
CNOT4O95628 AC010265.1-201ENST00000513509 211 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 RNA5SP165-201ENST00000517142 115 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.56□□□□□ -1.84
CNOT4O95628 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.56□□□□□ -1.84
CNOT4O95628 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.56□□□□□ -1.84
CNOT4O95628 AC060766.3-201ENST00000591442 263 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 FTX_3.1-201ENST00000610451 147 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 AC039056.2-201ENST00000622261 511 ntBASIC3.56□□□□□ -1.84
CNOT4O95628 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
CNOT4O95628 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNOT4O95628 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNOT4O95628 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNOT4O95628 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNOT4O95628 SNORD35B-201ENST00000363660 87 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
CNOT4O95628 Y_RNA.541-201ENST00000384640 113 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 SNORD78.2-201ENST00000391076 69 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AL079342.1-201ENST00000401460 267 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 RNU2-68P-201ENST00000410878 191 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC098614.2-201ENST00000426040 255 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AL691449.1-201ENST00000426570 421 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 YME1L1P1-201ENST00000429435 297 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 SNRPEP9-201ENST00000436794 238 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.55□□□□□ -1.84
CNOT4O95628 AC026784.1-201ENST00000507986 352 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.55□□□□□ -1.84
CNOT4O95628 SNORA31.18-201ENST00000517043 134 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC010186.2-204ENST00000537668 439 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC090617.3-201ENST00000573670 475 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.55□□□□□ -1.84
CNOT4O95628 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.55□□□□□ -1.84
CNOT4O95628 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.55□□□□□ -1.84
CNOT4O95628 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.55□□□□□ -1.84
CNOT4O95628 MIR6868-201ENST00000611215 58 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC240442.1-201ENST00000616055 283 ntBASIC3.55□□□□□ -1.84
CNOT4O95628 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNOT4O95628 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT4O95628 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CNOT4O95628 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT4O95628 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.54□□□□□ -1.84
CNOT4O95628 AC007656.2-201ENST00000624902 4547 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 RNU6-78P-201ENST00000362897 107 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 RNU6-886P-201ENST00000384319 105 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 MIR7-3-201ENST00000384898 110 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 BTF3L4P2-201ENST00000392798 346 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 SNORA3C-201ENST00000408792 125 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT4O95628 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.54□□□□□ -1.84
CNOT4O95628 AL445305.1-201ENST00000432577 575 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.54□□□□□ -1.84
CNOT4O95628 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.54□□□□□ -1.84
CNOT4O95628 snoU109.2-201ENST00000459316 135 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 TOMM22P6-201ENST00000465035 409 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.54□□□□□ -1.84
CNOT4O95628 RNU6-1012P-201ENST00000516606 109 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 SCARNA24.2-201ENST00000516968 130 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT4O95628 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 SCARNA4-202ENST00000625402 129 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.54□□□□□ -1.84
CNOT4O95628 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT4O95628 MAPK10-253ENST00000641010 4072 ntBASIC3.54□□□□□ -1.84
CNOT4O95628 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNOT4O95628 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 MIR423-201ENST00000362201 94 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 SNORA63.1-201ENST00000362493 131 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 SNORD113-8-201ENST00000363497 74 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 RNU6-884P-201ENST00000363889 107 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 RNU4-9P-201ENST00000364951 139 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 RNU6-72P-201ENST00000384285 79 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 SNORA19-201ENST00000384737 128 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 RNA5SP354-201ENST00000391247 136 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 MIR1298-201ENST00000408783 112 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 Y_RNA.602-201ENST00000410535 92 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
CNOT4O95628 AL358453.1-201ENST00000422522 250 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 HMGN2P30-201ENST00000423237 256 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AL500522.2-201ENST00000448562 343 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 snoU13.30-201ENST00000458951 104 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 RPS29P12-201ENST00000460178 152 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 RPL7P49-201ENST00000471402 708 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.53□□□□□ -1.84
CNOT4O95628 SNORA31.21-201ENST00000517180 77 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNOT4O95628 AC120057.2-201ENST00000571520 271 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AC073657.2-201ENST00000605661 303 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.53□□□□□ -1.84
CNOT4O95628 AC069200.1-201ENST00000609511 323 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 U2.14-201ENST00000615943 113 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 MIR6500-201ENST00000622700 86 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AC099506.2-201ENST00000623074 221 ntBASIC3.53□□□□□ -1.84
CNOT4O95628 AC012442.3-202ENST00000636742 206 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms