Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.76□□□□□ -2.13
CLDN9O95484 SNORA62.1-201ENST00000364287 154 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CLDN9O95484 MIR29B2-201ENST00000385055 81 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 MIR518E-201ENST00000385252 88 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 SNORA40.3-201ENST00000390964 122 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.76□□□□□ -2.13
CLDN9O95484 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN9O95484 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN9O95484 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.76□□□□□ -2.13
CLDN9O95484 RN7SKP256-201ENST00000517201 314 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.76□□□□□ -2.13
CLDN9O95484 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.76□□□□□ -2.13
CLDN9O95484 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.76□□□□□ -2.13
CLDN9O95484 AC023043.2-201ENST00000589678 1026 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AC025811.1-201ENST00000604312 472 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AC097372.5-201ENST00000623665 376 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AL603839.4-201ENST00000624658 1005 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
CLDN9O95484 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN9O95484 RNU6-1287P-201ENST00000362914 107 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 RNU6-527P-201ENST00000363425 104 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 RNU6-743P-201ENST00000364151 106 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 RNU6-611P-201ENST00000384276 104 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 RNU6-1060P-201ENST00000384664 107 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 RNU6-550P-201ENST00000391057 101 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 BTF3L4P1-201ENST00000413813 468 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 CYCSP46-201ENST00000423569 204 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 RPL31P35-201ENST00000431058 377 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 GPR143P-201ENST00000434155 205 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN9O95484 PRELID3BP1-201ENST00000457142 540 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 snoU109.1-201ENST00000459339 135 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN9O95484 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN9O95484 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN9O95484 DUXAP5-201ENST00000529668 529 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 AC022616.8-201ENST00000533569 253 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN9O95484 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.75□□□□□ -2.13
CLDN9O95484 MIR3915-201ENST00000578518 97 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 MIR4760-201ENST00000585040 80 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 AL096840.1-201ENST00000603287 93 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 AC005034.5-201ENST00000604219 466 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 MIR98-201ENST00000606724 119 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 MTND5P17-201ENST00000418405 1603 ntBASIC1.75□□□□□ -2.13
CLDN9O95484 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CLDN9O95484 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN9O95484 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN9O95484 RNU6-45P-201ENST00000384471 107 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 MIR499A-201ENST00000384903 122 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 MIR1262-201ENST00000408276 93 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 RNU2-3P-201ENST00000410144 191 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 RNU6-607P-201ENST00000411283 108 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL158823.1-201ENST00000418441 478 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN9O95484 AL365203.2-201ENST00000423444 196 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 USP9YP18-201ENST00000425912 695 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL591043.1-201ENST00000432461 424 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC009961.2-201ENST00000435771 251 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL022238.1-201ENST00000442557 355 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 MTND2P4-201ENST00000445034 1004 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN9O95484 AC079781.2-201ENST00000446424 169 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 RPL39P29-201ENST00000447779 157 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 GAPDHP17-201ENST00000449858 1001 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL133217.1-201ENST00000450980 425 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL162395.1-201ENST00000457882 422 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 RPL23AP63-201ENST00000498752 471 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 MTCYBP35-201ENST00000503630 1137 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 MTCYBP40-201ENST00000509390 1135 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC074344.1-201ENST00000512823 224 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN9O95484 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN9O95484 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN9O95484 AC110588.1-201ENST00000559699 137 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC137800.2-201ENST00000574375 120 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 MTATP6P24-201ENST00000576835 677 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC091135.1-201ENST00000585943 307 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL109918.3-201ENST00000603072 338 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AC087683.2-201ENST00000611384 326 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 AL159153.1-201ENST00000619688 317 ntBASIC1.74□□□□□ -2.13
CLDN9O95484 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
CLDN9O95484 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN9O95484 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CLDN9O95484 SNORD14D-201ENST00000384390 87 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 MIR29C-201ENST00000385231 88 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 BTF3L4P2-201ENST00000392798 346 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 CYCSP33-201ENST00000414485 327 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 BX510359.4-201ENST00000423750 193 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN9O95484 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 AC245102.2-201ENST00000448956 180 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 ART2BP-201ENST00000453501 499 ntBASIC1.73□□□□□ -2.13
CLDN9O95484 AL033528.1-201ENST00000453780 140 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms