Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RPL17P19-201ENST00000489069 552 ntBASIC3.47□□□□□ -1.85
CDKL5O76039 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL5O76039 AC008885.1-201ENST00000514930 301 ntBASIC3.47□□□□□ -1.85
CDKL5O76039 RNU6-475P-201ENST00000516073 104 ntBASIC3.47□□□□□ -1.85
CDKL5O76039 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.47□□□□□ -1.85
CDKL5O76039 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.47□□□□□ -1.85
CDKL5O76039 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL5O76039 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.47□□□□□ -1.85
CDKL5O76039 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL5O76039 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.47□□□□□ -1.85
CDKL5O76039 PRR13P7-201ENST00000605538 430 ntBASIC3.47□□□□□ -1.85
CDKL5O76039 RNU6-6P-201ENST00000606623 107 ntBASIC3.47□□□□□ -1.85
CDKL5O76039 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.47□□□□□ -1.85
CDKL5O76039 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDKL5O76039 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL5O76039 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CDKL5O76039 MIR412-201ENST00000362142 91 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 Y_RNA.39-201ENST00000362620 98 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 Y_RNA.245-201ENST00000364493 95 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RNU6-1317P-201ENST00000364582 104 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RNU6-101P-201ENST00000410323 104 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RNU2-33P-201ENST00000410344 192 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RN7SKP58-201ENST00000411010 305 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RNA5SP344-201ENST00000411081 104 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 PGBD4P6-201ENST00000421501 610 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL5O76039 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.46□□□□□ -1.86
CDKL5O76039 AC104332.2-201ENST00000429959 156 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 CBX3P6-201ENST00000430257 527 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL5O76039 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.46□□□□□ -1.86
CDKL5O76039 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL5O76039 AL583843.1-201ENST00000456070 346 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.46□□□□□ -1.86
CDKL5O76039 AL160314.1-201ENST00000490836 438 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 ACA59.1-201ENST00000515966 143 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 SNORA70.16-201ENST00000516390 95 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 RNA5SP290-201ENST00000517133 127 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDKL5O76039 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.46□□□□□ -1.86
CDKL5O76039 CPDP1-201ENST00000579660 283 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.46□□□□□ -1.86
CDKL5O76039 AL353743.1-202ENST00000431724 1695 ntBASIC3.46□□□□□ -1.86
CDKL5O76039 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL5O76039 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDKL5O76039 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDKL5O76039 Y_RNA.106-201ENST00000363189 100 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 RNY3P11-201ENST00000364153 102 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 Y_RNA.333-201ENST00000365274 102 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 RNU6-1318P-201ENST00000365389 103 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 RNU6-1181P-201ENST00000384191 106 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 Y_RNA.512-201ENST00000384518 102 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AL513475.1-201ENST00000406602 315 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AL096701.2-201ENST00000416920 238 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AC092573.2-201ENST00000434546 243 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 RPL21P2-201ENST00000440049 481 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.45□□□□□ -1.86
CDKL5O76039 CECR9-201ENST00000453421 199 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 KC877373.1-201ENST00000479066 408 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 MRPS35P2-201ENST00000508242 191 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL5O76039 Y_RNA.721-201ENST00000517207 102 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AC025755.1-201ENST00000521306 278 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 HSBP1P1-201ENST00000555205 166 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 MIR3668-201ENST00000582138 75 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 AC090617.7-201ENST00000623952 126 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 MIR4272-201ENST00000635924 64 ntBASIC3.45□□□□□ -1.86
CDKL5O76039 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CDKL5O76039 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL5O76039 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL5O76039 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDKL5O76039 RNA5SP374-201ENST00000362939 125 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 SNORA9.2-201ENST00000365361 133 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 U8.8-201ENST00000365399 135 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 RNU6-933P-201ENST00000384424 107 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 SNORA11.1-201ENST00000408133 129 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 RNU6-1156P-201ENST00000410365 100 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 Y_RNA.623-201ENST00000411128 95 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 RNU2-71P-201ENST00000411395 189 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 SNORD56-201ENST00000413522 71 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 VDAC1P3-201ENST00000434069 851 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 PIGFP3-201ENST00000441918 722 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC139453.3-201ENST00000493276 369 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC114801.2-201ENST00000503825 781 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 SNORA31.8-201ENST00000516327 108 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL5O76039 H3F3AP1-201ENST00000559984 334 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 MIR4273-201ENST00000582824 84 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC012493.2-201ENST00000595083 291 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AL158827.2-201ENST00000602494 330 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC009314.1-201ENST00000603871 304 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC124312.5-201ENST00000604451 268 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AP002826.1-201ENST00000608835 315 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AL691447.3-201ENST00000635020 330 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 ZNF72P-201ENST00000425869 1908 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 AC008669.1-201ENST00000565823 2178 ntBASIC3.44□□□□□ -1.86
CDKL5O76039 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms