Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 CBX3P8-201ENST00000532412 525 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS4BO75351 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
VPS4BO75351 MTND4LP5-201ENST00000605152 292 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 AC107294.3-201ENST00000609211 526 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 AC083806.3-201ENST00000614016 455 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS4BO75351 AC073308.1-201ENST00000623696 305 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS4BO75351 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS4BO75351 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
VPS4BO75351 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS4BO75351 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS4BO75351 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VPS4BO75351 RNU6-227P-201ENST00000362865 103 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 SNORD50.1-201ENST00000362987 71 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 RNU6-784P-201ENST00000384330 106 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AP000275.1-201ENST00000411943 390 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 AC079354.2-201ENST00000453523 154 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 snoU13.28-201ENST00000459235 104 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 SNORA25.10-201ENST00000515926 124 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 SNORA31.18-201ENST00000517043 134 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 RNU6-264P-201ENST00000517134 104 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 AC023442.1-201ENST00000531247 422 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 MIR5701-3-201ENST00000578890 82 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 MIR4273-201ENST00000582824 84 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 MIR5701-1-201ENST00000585138 82 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AL158827.2-201ENST00000602494 330 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AC009318.2-201ENST00000610917 651 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 MIR5701-2-201ENST00000615634 82 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 AC068831.7-201ENST00000616954 363 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS4BO75351 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS4BO75351 AL691447.3-201ENST00000635020 330 ntBASIC3.25□□□□□ -1.89
VPS4BO75351 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS4BO75351 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4BO75351 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4BO75351 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 Y_RNA.158-201ENST00000363651 101 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 Y_RNA.428-201ENST00000384078 102 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 Y_RNA.577-201ENST00000384794 101 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AL138885.1-201ENST00000405921 675 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 CST9LP2-201ENST00000437612 320 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC099799.1-201ENST00000439809 192 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS4BO75351 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS4BO75351 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS4BO75351 RNU7-23P-201ENST00000459465 62 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 FO393415.2-201ENST00000480085 343 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC116655.1-201ENST00000508324 901 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 RNU6-1137P-201ENST00000517073 99 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 SNORD116.3-201ENST00000517176 78 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4BO75351 AC010186.2-204ENST00000537668 439 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC006199.1-201ENST00000548728 219 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 HMGN2P15-201ENST00000585707 270 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AP001836.1-201ENST00000604675 523 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC007485.1-201ENST00000616755 206 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC006386.2-201ENST00000624491 75 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 AC012005.1-201ENST00000624575 75 ntBASIC3.24□□□□□ -1.89
VPS4BO75351 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS4BO75351 ZNF299P-201ENST00000406845 1804 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPS4BO75351 Y_RNA.80-201ENST00000362996 102 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 RNU6-595P-201ENST00000363944 107 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 MIR521-1-201ENST00000384902 87 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 MRPL42P3-201ENST00000401492 326 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 FTH1P15-201ENST00000406984 280 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 AC023141.4-201ENST00000412031 328 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 NUP35P1-201ENST00000422734 947 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS4BO75351 GSTA11P-201ENST00000452866 669 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS4BO75351 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS4BO75351 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 MIR7112-201ENST00000616126 65 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS4BO75351 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
VPS4BO75351 MTND5P9-201ENST00000503854 1755 ntBASIC3.23□□□□□ -1.89
VPS4BO75351 MAPK10-266ENST00000641066 6555 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms