Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.08□□□□□ -2.08
LCMT2O60294 CYP2C59P-201ENST00000457790 269 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.08□□□□□ -2.08
LCMT2O60294 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.08□□□□□ -2.08
LCMT2O60294 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.08□□□□□ -2.08
LCMT2O60294 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AP001893.2-201ENST00000526949 202 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC245505.1-201ENST00000556398 224 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.08□□□□□ -2.08
LCMT2O60294 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.08□□□□□ -2.08
LCMT2O60294 AC025165.5-201ENST00000602802 578 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC123912.5-201ENST00000605470 343 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC002044.1-201ENST00000606707 158 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AC064807.4-201ENST00000607201 407 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 AF250324.2-201ENST00000608299 610 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 SCARNA4-202ENST00000625402 129 ntBASIC2.08□□□□□ -2.08
LCMT2O60294 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LCMT2O60294 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCMT2O60294 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
LCMT2O60294 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LCMT2O60294 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
LCMT2O60294 RNU1-72P-201ENST00000362976 153 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 SNORA16B-201ENST00000364674 135 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 Y_RNA.372-201ENST00000365599 102 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 RNU6-434P-201ENST00000384376 107 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 RNU6-843P-201ENST00000384454 104 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.07□□□□□ -2.08
LCMT2O60294 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.07□□□□□ -2.08
LCMT2O60294 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.07□□□□□ -2.08
LCMT2O60294 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.07□□□□□ -2.08
LCMT2O60294 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.07□□□□□ -2.08
LCMT2O60294 SRRM1P2-201ENST00000464531 1192 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 AC083798.1-201ENST00000472671 131 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 AP001025.1-201ENST00000486139 332 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 AC009646.1-201ENST00000510455 318 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 SNORA25.17-201ENST00000517184 124 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 SNORA31.23-201ENST00000517219 133 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.07□□□□□ -2.08
LCMT2O60294 CR383656.8-201ENST00000549046 145 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 MTCO3P23-201ENST00000561363 289 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 MIR4424-201ENST00000585257 86 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.07□□□□□ -2.08
LCMT2O60294 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
LCMT2O60294 Z69720.2-201ENST00000624755 279 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
LCMT2O60294 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
LCMT2O60294 RNU6-37P-201ENST00000362692 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-78P-201ENST00000362897 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-11P-201ENST00000364234 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-25P-201ENST00000383873 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 SNORA69-201ENST00000383895 132 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-1-201ENST00000383898 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-48P-201ENST00000384161 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-36P-201ENST00000384172 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-4P-201ENST00000384205 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-5P-201ENST00000384238 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-3P-201ENST00000384314 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-16P-201ENST00000384385 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-15P-201ENST00000384534 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-2-201ENST00000384627 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-29P-201ENST00000384637 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-9-201ENST00000384776 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-33P-201ENST00000384793 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LCMT2O60294 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCMT2O60294 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.06□□□□□ -2.08
LCMT2O60294 AL161788.1-201ENST00000441805 169 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 AC009238.1-201ENST00000442165 424 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 MTND1P1-201ENST00000445453 368 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 AC009237.6-201ENST00000446969 424 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 PSPHP1-201ENST00000450062 261 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.06□□□□□ -2.08
LCMT2O60294 AC019235.1-201ENST00000503847 207 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.06□□□□□ -2.08
LCMT2O60294 SCARNA16.3-201ENST00000516595 184 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 Y_RNA.704-201ENST00000516851 102 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-835P-201ENST00000516974 104 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 AK6P1-201ENST00000540219 478 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 AC021646.1-201ENST00000605469 484 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-6P-201ENST00000606623 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 RNU6-91P-201ENST00000607774 107 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 AC015540.1-201ENST00000615828 501 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 uc_338.34-201ENST00000617467 174 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LCMT2O60294 MTND4P14-201ENST00000435799 1354 ntBASIC2.06□□□□□ -2.08
LCMT2O60294 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
LCMT2O60294 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCMT2O60294 RNU6-1085P-201ENST00000363576 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms