Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AL357139.1-201ENST00000407792 426 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AC000111.3-201ENST00000433478 193 ntBASIC1.54□□□□□ -2.16
RNF13O43567 MTATP6P16-201ENST00000434543 526 ntBASIC1.54□□□□□ -2.16
RNF13O43567 BZW1P2-201ENST00000473537 826 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AC132942.1-201ENST00000486753 483 ntBASIC1.54□□□□□ -2.16
RNF13O43567 RNVU1-2-201ENST00000516326 135 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.54□□□□□ -2.16
RNF13O43567 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF13O43567 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF13O43567 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.54□□□□□ -2.16
RNF13O43567 AL356057.1-201ENST00000533798 831 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
RNF13O43567 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
RNF13O43567 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
RNF13O43567 MIR3169-201ENST00000578032 83 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AL121992.2-201ENST00000606262 256 ntBASIC1.54□□□□□ -2.16
RNF13O43567 AC130454.1-201ENST00000622948 401 ntBASIC1.54□□□□□ -2.16
RNF13O43567 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.54□□□□□ -2.16
RNF13O43567 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RNF13O43567 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
RNF13O43567 RNU6-1285P-201ENST00000363480 105 ntBASIC1.53□□□□□ -2.16
RNF13O43567 RNU5F-7P-201ENST00000363696 115 ntBASIC1.53□□□□□ -2.16
RNF13O43567 SNORD32B-201ENST00000364460 84 ntBASIC1.53□□□□□ -2.16
RNF13O43567 Y_RNA.576-201ENST00000384781 102 ntBASIC1.53□□□□□ -2.16
RNF13O43567 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RNF13O43567 CYCSP33-201ENST00000414485 327 ntBASIC1.53□□□□□ -2.16
RNF13O43567 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.53□□□□□ -2.16
RNF13O43567 TAF9P1-201ENST00000445421 515 ntBASIC1.53□□□□□ -2.16
RNF13O43567 TAF9P2-201ENST00000454958 515 ntBASIC1.53□□□□□ -2.16
RNF13O43567 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.53□□□□□ -2.16
RNF13O43567 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
RNF13O43567 AC104806.1-201ENST00000508720 308 ntBASIC1.53□□□□□ -2.16
RNF13O43567 SCARNA24.1-201ENST00000516465 137 ntBASIC1.53□□□□□ -2.16
RNF13O43567 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF13O43567 AC087441.2-201ENST00000529141 262 ntBASIC1.53□□□□□ -2.16
RNF13O43567 AC103987.3-201ENST00000582071 292 ntBASIC1.53□□□□□ -2.16
RNF13O43567 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF13O43567 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.53□□□□□ -2.16
RNF13O43567 AC091304.9-201ENST00000612091 226 ntBASIC1.53□□□□□ -2.16
RNF13O43567 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.53□□□□□ -2.16
RNF13O43567 AC008993.2-201ENST00000631744 806 ntBASIC1.53□□□□□ -2.16
RNF13O43567 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RNF13O43567 MTND5P17-201ENST00000418405 1603 ntBASIC1.52□□□□□ -2.17
RNF13O43567 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
RNF13O43567 NCOR1P3-201ENST00000420479 303 ntBASIC1.52□□□□□ -2.17
RNF13O43567 KATNBL1P3-201ENST00000443475 909 ntBASIC1.52□□□□□ -2.17
RNF13O43567 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.52□□□□□ -2.17
RNF13O43567 EPS15P1-201ENST00000448836 336 ntBASIC1.52□□□□□ -2.17
RNF13O43567 ZNF114P1-201ENST00000453500 292 ntBASIC1.52□□□□□ -2.17
RNF13O43567 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.52□□□□□ -2.17
RNF13O43567 AC074344.1-201ENST00000512823 224 ntBASIC1.52□□□□□ -2.17
RNF13O43567 AC104136.1-201ENST00000512969 394 ntBASIC1.52□□□□□ -2.17
RNF13O43567 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
RNF13O43567 AC005771.1-201ENST00000585581 349 ntBASIC1.52□□□□□ -2.17
RNF13O43567 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
RNF13O43567 AC009159.2-201ENST00000617603 606 ntBASIC1.52□□□□□ -2.17
RNF13O43567 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.52□□□□□ -2.17
RNF13O43567 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RNF13O43567 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RNF13O43567 RNU6-105P-201ENST00000363909 104 ntBASIC1.51□□□□□ -2.17
RNF13O43567 Y_RNA.332-201ENST00000365271 113 ntBASIC1.51□□□□□ -2.17
RNF13O43567 SNORD115-7-201ENST00000365306 82 ntBASIC1.51□□□□□ -2.17
RNF13O43567 RNU6-169P-201ENST00000365336 107 ntBASIC1.51□□□□□ -2.17
RNF13O43567 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RNF13O43567 RNU6-1245P-201ENST00000411130 106 ntBASIC1.51□□□□□ -2.17
RNF13O43567 OR6C66P-201ENST00000414917 930 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.51□□□□□ -2.17
RNF13O43567 AL513124.1-201ENST00000450410 614 ntBASIC1.51□□□□□ -2.17
RNF13O43567 RNU1-131P-201ENST00000458943 161 ntBASIC1.51□□□□□ -2.17
RNF13O43567 RAP1BP2-201ENST00000478270 544 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF13O43567 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.51□□□□□ -2.17
RNF13O43567 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF13O43567 RNU6-1220P-201ENST00000517126 108 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.51□□□□□ -2.17
RNF13O43567 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
RNF13O43567 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF13O43567 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
RNF13O43567 AL034555.1-201ENST00000604816 211 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AC123912.5-201ENST00000605470 343 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF13O43567 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AC004223.4-201ENST00000612426 332 ntBASIC1.51□□□□□ -2.17
RNF13O43567 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
RNF13O43567 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF13O43567 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
RNF13O43567 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.5□□□□□ -2.17
RNF13O43567 RNU6-45P-201ENST00000384471 107 ntBASIC1.5□□□□□ -2.17
RNF13O43567 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
RNF13O43567 Y_RNA.598-201ENST00000410480 95 ntBASIC1.5□□□□□ -2.17
RNF13O43567 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF13O43567 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF13O43567 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.5□□□□□ -2.17
RNF13O43567 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF13O43567 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
RNF13O43567 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.5□□□□□ -2.17
RNF13O43567 RNU6-295P-201ENST00000516901 104 ntBASIC1.5□□□□□ -2.17
RNF13O43567 RNA5SP490-201ENST00000517141 136 ntBASIC1.5□□□□□ -2.17
RNF13O43567 AP000889.1-201ENST00000530968 660 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms