Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL139022.2-201ENST00000606934 443 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AP000484.1-201ENST00000620067 1252 ntBASIC1.15□□□□□ -2.23
SGCEO43556 RMST_7.1-201ENST00000621935 268 ntBASIC1.15□□□□□ -2.23
SGCEO43556 OR4G3P-201ENST00000633500 913 ntBASIC1.15□□□□□ -2.23
SGCEO43556 LINC02555-201ENST00000563933 1951 ntBASIC1.15□□□□□ -2.23
SGCEO43556 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SGCEO43556 MTND4P16-201ENST00000466108 1367 ntBASIC1.14□□□□□ -2.23
SGCEO43556 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SGCEO43556 RNU6-384P-201ENST00000364900 104 ntBASIC1.14□□□□□ -2.23
SGCEO43556 Y_RNA.332-201ENST00000365271 113 ntBASIC1.14□□□□□ -2.23
SGCEO43556 RNU6-360P-201ENST00000390944 104 ntBASIC1.14□□□□□ -2.23
SGCEO43556 SNORA40.4-201ENST00000390971 128 ntBASIC1.14□□□□□ -2.23
SGCEO43556 RNU4-62P-201ENST00000410125 130 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.14□□□□□ -2.23
SGCEO43556 RPL22P18-201ENST00000417197 377 ntBASIC1.14□□□□□ -2.23
SGCEO43556 EBAG9P1-201ENST00000418955 543 ntBASIC1.14□□□□□ -2.23
SGCEO43556 RPS15AP12-201ENST00000419498 388 ntBASIC1.14□□□□□ -2.23
SGCEO43556 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.14□□□□□ -2.23
SGCEO43556 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.14□□□□□ -2.23
SGCEO43556 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.14□□□□□ -2.23
SGCEO43556 AL591043.1-201ENST00000432461 424 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.14□□□□□ -2.23
SGCEO43556 RPL22P17-201ENST00000438729 315 ntBASIC1.14□□□□□ -2.23
SGCEO43556 JTBP1-201ENST00000441314 247 ntBASIC1.14□□□□□ -2.23
SGCEO43556 USP9YP17-201ENST00000444617 696 ntBASIC1.14□□□□□ -2.23
SGCEO43556 HMGN2P18-201ENST00000450680 270 ntBASIC1.14□□□□□ -2.23
SGCEO43556 RPL36AP21-201ENST00000490372 323 ntBASIC1.14□□□□□ -2.23
SGCEO43556 RN7SKP219-201ENST00000516825 296 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AP003033.1-201ENST00000527244 415 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.14□□□□□ -2.23
SGCEO43556 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
SGCEO43556 MIR4524B-201ENST00000581569 115 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC104984.5-201ENST00000586878 94 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.14□□□□□ -2.23
SGCEO43556 DEFB131E-202ENST00000602581 683 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC069431.2-201ENST00000604149 1099 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AL139286.2-201ENST00000606838 396 ntBASIC1.14□□□□□ -2.23
SGCEO43556 AC004808.1-201ENST00000627671 721 ntBASIC1.14□□□□□ -2.23
SGCEO43556 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.14□□□□□ -2.23
SGCEO43556 ICE2P2-201ENST00000483823 2787 ntBASIC1.13□□□□□ -2.23
SGCEO43556 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
SGCEO43556 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
SGCEO43556 RNU6-1222P-201ENST00000384615 107 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AC139712.2-201ENST00000424302 339 ntBASIC1.13□□□□□ -2.23
SGCEO43556 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SGCEO43556 AC137499.1-201ENST00000427602 88 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AC108667.1-201ENST00000428618 249 ntBASIC1.13□□□□□ -2.23
SGCEO43556 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.13□□□□□ -2.23
SGCEO43556 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
SGCEO43556 MTND1P32-201ENST00000433043 938 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.13□□□□□ -2.23
SGCEO43556 AC009474.2-201ENST00000451383 136 ntBASIC1.13□□□□□ -2.23
SGCEO43556 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.13□□□□□ -2.23
SGCEO43556 AP000797.1-201ENST00000478870 387 ntBASIC1.13□□□□□ -2.23
SGCEO43556 RPL26P26-201ENST00000480251 434 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AC005741.1-201ENST00000511094 432 ntBASIC1.13□□□□□ -2.23
SGCEO43556 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.13□□□□□ -2.23
SGCEO43556 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.13□□□□□ -2.23
SGCEO43556 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.13□□□□□ -2.23
SGCEO43556 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.13□□□□□ -2.23
SGCEO43556 MIR5094-201ENST00000578766 85 ntBASIC1.13□□□□□ -2.23
SGCEO43556 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.13□□□□□ -2.23
SGCEO43556 BNIP3P31-201ENST00000604515 566 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AC018889.1-201ENST00000605372 397 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AL050343.2-201ENST00000607338 280 ntBASIC1.13□□□□□ -2.23
SGCEO43556 AC012409.4-201ENST00000612923 249 ntBASIC1.13□□□□□ -2.23
SGCEO43556 RMST_4.1-201ENST00000616886 107 ntBASIC1.13□□□□□ -2.23
SGCEO43556 MIR8063-201ENST00000621930 81 ntBASIC1.13□□□□□ -2.23
SGCEO43556 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.13□□□□□ -2.23
SGCEO43556 AC103706.2-201ENST00000638080 240 ntBASIC1.13□□□□□ -2.23
SGCEO43556 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SGCEO43556 RNU6-931P-201ENST00000363850 107 ntBASIC1.12□□□□□ -2.23
SGCEO43556 RNA5SP99-201ENST00000364020 114 ntBASIC1.12□□□□□ -2.23
SGCEO43556 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SGCEO43556 MIR578-201ENST00000384828 96 ntBASIC1.12□□□□□ -2.23
SGCEO43556 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.12□□□□□ -2.23
SGCEO43556 RPL21P111-201ENST00000418453 477 ntBASIC1.12□□□□□ -2.23
SGCEO43556 AC007969.2-201ENST00000441891 191 ntBASIC1.12□□□□□ -2.23
SGCEO43556 FTH1P25-201ENST00000447665 469 ntBASIC1.12□□□□□ -2.23
SGCEO43556 AL031313.1-201ENST00000448435 256 ntBASIC1.12□□□□□ -2.23
SGCEO43556 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.12□□□□□ -2.23
SGCEO43556 AC079140.2-201ENST00000506193 142 ntBASIC1.12□□□□□ -2.23
SGCEO43556 MTCO3P9-201ENST00000506989 781 ntBASIC1.12□□□□□ -2.23
SGCEO43556 RNU5F-2P-201ENST00000516066 82 ntBASIC1.12□□□□□ -2.23
SGCEO43556 AC022616.6-201ENST00000520479 119 ntBASIC1.12□□□□□ -2.23
SGCEO43556 RRN3P3-201ENST00000549207 578 ntBASIC1.12□□□□□ -2.23
SGCEO43556 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.12□□□□□ -2.23
SGCEO43556 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.12□□□□□ -2.23
SGCEO43556 MIR3118-1-201ENST00000581787 76 ntBASIC1.12□□□□□ -2.23
SGCEO43556 AL355802.3-201ENST00000607571 545 ntBASIC1.12□□□□□ -2.23
SGCEO43556 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.12□□□□□ -2.23
SGCEO43556 AC092106.3-201ENST00000611308 722 ntBASIC1.12□□□□□ -2.23
SGCEO43556 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.12□□□□□ -2.23
SGCEO43556 AC120349.3-201ENST00000624377 529 ntBASIC1.12□□□□□ -2.23
SGCEO43556 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SGCEO43556 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SGCEO43556 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.12□□□□□ -2.23
SGCEO43556 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
SGCEO43556 SNORD56.2-201ENST00000363242 71 ntBASIC1.11□□□□□ -2.23
SGCEO43556 Y_RNA.255-201ENST00000364581 97 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms