Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC068587.5-201ENST00000528506 175 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC022616.8-201ENST00000533569 253 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.93□□□□□ -2.1
RIPK2O43353 AC009063.1-201ENST00000563342 702 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.93□□□□□ -2.1
RIPK2O43353 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
RIPK2O43353 MIR4513-201ENST00000581077 86 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 MIR3162-201ENST00000581818 82 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC008521.1-201ENST00000587471 187 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC068790.2-201ENST00000602601 557 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC073648.5-201ENST00000603502 305 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC103591.3-201ENST00000608684 209 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.93□□□□□ -2.1
RIPK2O43353 U2.15-201ENST00000611544 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.16-201ENST00000613119 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.12-201ENST00000613778 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.20-201ENST00000613956 192 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.9-201ENST00000615427 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.11-201ENST00000616345 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.2-201ENST00000616535 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.3-201ENST00000617785 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.19-201ENST00000618602 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 RNU2-1-201ENST00000618664 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.6-201ENST00000619225 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.5-201ENST00000619465 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 U2.10-201ENST00000620268 191 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 MIR6852-201ENST00000621699 66 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AC138649.3-201ENST00000622154 254 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 AL157786.1-207ENST00000627771 695 ntBASIC1.93□□□□□ -2.1
RIPK2O43353 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RIPK2O43353 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RIPK2O43353 AL136360.1-201ENST00000503377 1900 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RIPK2O43353 RNU6-179P-201ENST00000363350 107 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 RNU6-1097P-201ENST00000363586 107 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Y_RNA.159-201ENST00000363674 87 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Y_RNA.194-201ENST00000363985 102 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Y_RNA.318-201ENST00000365131 97 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Y_RNA.436-201ENST00000384097 102 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 RNU6-456P-201ENST00000384493 107 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 RNU6-1274P-201ENST00000384557 107 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Y_RNA.559-201ENST00000384686 107 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Y_RNA.582-201ENST00000391023 95 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 MIR1283-2-201ENST00000408621 87 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 RNU6-1140P-201ENST00000410517 106 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 RNU2-66P-201ENST00000410650 161 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 AL663109.1-201ENST00000411498 844 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 SRIP3-201ENST00000413200 219 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.92□□□□□ -2.1
RIPK2O43353 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.92□□□□□ -2.1
RIPK2O43353 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.92□□□□□ -2.1
RIPK2O43353 AC079781.2-201ENST00000446424 169 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 UBE2DNL-203ENST00000474922 222 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 MTND2P33-201ENST00000506452 1031 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RIPK2O43353 AC091133.4-201ENST00000511142 308 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 MTND3P5-201ENST00000512798 333 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.92□□□□□ -2.1
RIPK2O43353 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.92□□□□□ -2.1
RIPK2O43353 AP003392.2-201ENST00000527269 208 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 AC018630.3-201ENST00000542637 96 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 ADI1P3-201ENST00000549509 470 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 SUB1P2-201ENST00000556401 297 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 MIR548AC-201ENST00000585049 88 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 AL158032.1-201ENST00000605401 106 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 AL139286.2-201ENST00000606838 396 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 Z99129.1-201ENST00000612510 255 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 AL132822.1-201ENST00000617063 513 ntBASIC1.92□□□□□ -2.1
RIPK2O43353 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
RIPK2O43353 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RIPK2O43353 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RIPK2O43353 SNORD115-3-201ENST00000363100 82 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 SNORA62.1-201ENST00000364287 154 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 SNORD14B-201ENST00000364533 90 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 SNORD14D-201ENST00000384390 87 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 SNORA64-201ENST00000384674 134 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 Y_RNA.576-201ENST00000384781 102 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 MIR10A-201ENST00000385043 110 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 CISD1P1-201ENST00000393907 327 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 RNU2-16P-201ENST00000410712 136 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK2O43353 AC010975.2-201ENST00000427781 588 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AL589823.1-201ENST00000429577 183 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 DLGAP5P1-201ENST00000430307 464 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK2O43353 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 RPL21P99-201ENST00000480369 423 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK2O43353 AC112206.3-201ENST00000514578 389 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 RNU6-685P-201ENST00000517088 95 ntBASIC1.91□□□□□ -2.1
RIPK2O43353 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK2O43353 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK2O43353 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.91□□□□□ -2.1
RIPK2O43353 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.91□□□□□ -2.1
RIPK2O43353 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms