Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC006028.1-201ENST00000438379 402 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM38O00635 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM38O00635 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM38O00635 RPL21P93-201ENST00000480465 489 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC015911.1-201ENST00000495111 156 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM38O00635 RNU1-86P-201ENST00000516108 154 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 RNU6-1143P-201ENST00000516125 104 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 Y_RNA.680-201ENST00000516441 93 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 RNU1-107P-201ENST00000516617 154 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 Y_RNA.721-201ENST00000517207 102 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM38O00635 MIR5004-201ENST00000579078 107 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM38O00635 MIR4325-201ENST00000583049 90 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM38O00635 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM38O00635 AL451007.1-201ENST00000595491 289 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC092747.3-201ENST00000603769 301 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AL162713.1-201ENST00000604480 262 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AL031601.2-202ENST00000622650 282 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 AC138627.2-201ENST00000624202 601 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 MIR3199-2-201ENST00000636243 86 ntBASIC3.31□□□□□ -1.88
TRIM38O00635 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM38O00635 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM38O00635 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM38O00635 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM38O00635 AC017071.1-201ENST00000564407 2204 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 ADAM3A-203ENST00000461344 2157 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 Y_RNA.80-201ENST00000362996 102 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNA5SP197-201ENST00000363357 119 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNU6-99P-201ENST00000364721 107 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNU6-384P-201ENST00000364900 104 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 Y_RNA.404-201ENST00000383978 102 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 Y_RNA.447-201ENST00000384184 113 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 MIR518D-201ENST00000385014 87 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 MIR10A-201ENST00000385043 110 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNU6-1109P-201ENST00000391187 107 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AL357075.1-201ENST00000404107 726 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 POLHP1-201ENST00000411806 470 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 BX682237.1-201ENST00000415016 335 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RPLP0P7-201ENST00000416050 667 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 ATG3P1-201ENST00000419507 911 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM38O00635 TOMM20P4-201ENST00000427861 435 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM38O00635 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM38O00635 DYNLL1P5-201ENST00000467158 270 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 HMGB3P17-201ENST00000504195 649 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 HIGD1AP13-201ENST00000509878 289 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNU6-189P-201ENST00000516120 101 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNU6-406P-201ENST00000516470 107 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RNU6-699P-201ENST00000517081 110 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 RN7SKP40-201ENST00000517211 242 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM38O00635 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM38O00635 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM38O00635 AC006199.1-201ENST00000548728 219 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC021739.1-201ENST00000559631 174 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM38O00635 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM38O00635 AC100812.1-201ENST00000607622 580 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC011890.2-201ENST00000613393 294 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC103705.1-201ENST00000619013 241 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 SCARNA4-202ENST00000625402 129 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 AC099654.7-201ENST00000635788 2127 ntBASIC3.3□□□□□ -1.88
TRIM38O00635 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM38O00635 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TRIM38O00635 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM38O00635 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM38O00635 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TRIM38O00635 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM38O00635 RNU6-450P-201ENST00000364654 107 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 CD24P4-201ENST00000382840 243 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 RNU6-1062P-201ENST00000383908 107 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM38O00635 UBA52P6-201ENST00000399822 382 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AC023141.4-201ENST00000412031 328 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 CYCSP33-201ENST00000414485 327 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM38O00635 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM38O00635 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM38O00635 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM38O00635 RPL22P13-201ENST00000493291 347 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM38O00635 AC008526.1-201ENST00000509149 338 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 RNU6-120P-201ENST00000516077 103 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 CYCSP27-201ENST00000527643 293 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM38O00635 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AL138726.1-201ENST00000614873 333 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM38O00635 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
TRIM38O00635 AC110079.1-202ENST00000635213 138 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms