Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
RTCAO00442 Y_RNA.167-201ENST00000363735 109 ntBASIC2.37□□□□□ -2.03
RTCAO00442 Y_RNA.324-201ENST00000365165 102 ntBASIC2.37□□□□□ -2.03
RTCAO00442 RNU4-20P-201ENST00000365601 151 ntBASIC2.37□□□□□ -2.03
RTCAO00442 MIR17-201ENST00000385012 84 ntBASIC2.37□□□□□ -2.03
RTCAO00442 MIR27B-201ENST00000385129 97 ntBASIC2.37□□□□□ -2.03
RTCAO00442 AL162578.1-201ENST00000406202 378 ntBASIC2.37□□□□□ -2.03
RTCAO00442 USP9YP27-201ENST00000418455 438 ntBASIC2.37□□□□□ -2.03
RTCAO00442 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.37□□□□□ -2.03
RTCAO00442 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.37□□□□□ -2.03
RTCAO00442 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.37□□□□□ -2.03
RTCAO00442 RPS29P25-201ENST00000481709 171 ntBASIC2.37□□□□□ -2.03
RTCAO00442 AC107032.1-201ENST00000485945 480 ntBASIC2.37□□□□□ -2.03
RTCAO00442 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
RTCAO00442 RNA5SP401-201ENST00000515920 127 ntBASIC2.37□□□□□ -2.03
RTCAO00442 Y_RNA.704-201ENST00000516851 102 ntBASIC2.37□□□□□ -2.03
RTCAO00442 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.37□□□□□ -2.03
RTCAO00442 CYCSP27-201ENST00000527643 293 ntBASIC2.37□□□□□ -2.03
RTCAO00442 AP000889.2-201ENST00000532684 490 ntBASIC2.37□□□□□ -2.03
RTCAO00442 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.37□□□□□ -2.03
RTCAO00442 MIR5583-1-201ENST00000580941 59 ntBASIC2.37□□□□□ -2.03
RTCAO00442 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
RTCAO00442 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.37□□□□□ -2.03
RTCAO00442 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
RTCAO00442 MIR3688-2-201ENST00000636963 87 ntBASIC2.37□□□□□ -2.03
RTCAO00442 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
RTCAO00442 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTCAO00442 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
RTCAO00442 Y_RNA.573-201ENST00000384763 105 ntBASIC2.36□□□□□ -2.03
RTCAO00442 MIR518C-201ENST00000384822 101 ntBASIC2.36□□□□□ -2.03
RTCAO00442 FTH1P15-201ENST00000406984 280 ntBASIC2.36□□□□□ -2.03
RTCAO00442 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.36□□□□□ -2.03
RTCAO00442 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.36□□□□□ -2.03
RTCAO00442 AC012308.1-201ENST00000451232 178 ntBASIC2.36□□□□□ -2.03
RTCAO00442 RNU6-1208P-201ENST00000459588 107 ntBASIC2.36□□□□□ -2.03
RTCAO00442 AC140059.1-201ENST00000489238 361 ntBASIC2.36□□□□□ -2.03
RTCAO00442 Y_RNA.654-201ENST00000497848 106 ntBASIC2.36□□□□□ -2.03
RTCAO00442 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.36□□□□□ -2.03
RTCAO00442 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.36□□□□□ -2.03
RTCAO00442 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.36□□□□□ -2.03
RTCAO00442 RNA5SP148-201ENST00000516527 94 ntBASIC2.36□□□□□ -2.03
RTCAO00442 COPS8P3-201ENST00000526024 482 ntBASIC2.36□□□□□ -2.03
RTCAO00442 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.36□□□□□ -2.03
RTCAO00442 BNIP3P6-201ENST00000549284 499 ntBASIC2.36□□□□□ -2.03
RTCAO00442 AC146944.4-201ENST00000602697 718 ntBASIC2.36□□□□□ -2.03
RTCAO00442 AL713866.2-201ENST00000603579 219 ntBASIC2.36□□□□□ -2.03
RTCAO00442 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTCAO00442 AC121333.1-201ENST00000567488 2709 ntBASIC2.36□□□□□ -2.03
RTCAO00442 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTCAO00442 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.36□□□□□ -2.03
RTCAO00442 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.35□□□□□ -2.03
RTCAO00442 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTCAO00442 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTCAO00442 Y_RNA.231-201ENST00000364358 102 ntBASIC2.35□□□□□ -2.03
RTCAO00442 RNU6-522P-201ENST00000364497 107 ntBASIC2.35□□□□□ -2.03
RTCAO00442 RNU6-843P-201ENST00000384454 104 ntBASIC2.35□□□□□ -2.03
RTCAO00442 RNU1-57P-201ENST00000384491 166 ntBASIC2.35□□□□□ -2.03
RTCAO00442 RNA5SP118-201ENST00000410385 109 ntBASIC2.35□□□□□ -2.03
RTCAO00442 Y_RNA.619-201ENST00000410951 90 ntBASIC2.35□□□□□ -2.03
RTCAO00442 RNU6-1068P-201ENST00000410958 103 ntBASIC2.35□□□□□ -2.03
RTCAO00442 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.35□□□□□ -2.03
RTCAO00442 AL356379.1-201ENST00000414105 126 ntBASIC2.35□□□□□ -2.03
RTCAO00442 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 MTND3P16-201ENST00000452205 344 ntBASIC2.35□□□□□ -2.03
RTCAO00442 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.35□□□□□ -2.03
RTCAO00442 MED28P2-201ENST00000475771 317 ntBASIC2.35□□□□□ -2.03
RTCAO00442 RPL23AP45-201ENST00000476406 468 ntBASIC2.35□□□□□ -2.03
RTCAO00442 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.35□□□□□ -2.03
RTCAO00442 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RTCAO00442 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.35□□□□□ -2.03
RTCAO00442 SNORA25.11-201ENST00000515935 105 ntBASIC2.35□□□□□ -2.03
RTCAO00442 Y_RNA.687-201ENST00000516558 91 ntBASIC2.35□□□□□ -2.03
RTCAO00442 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 AC023050.3-201ENST00000541142 333 ntBASIC2.35□□□□□ -2.03
RTCAO00442 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 Z82243.1-201ENST00000609432 473 ntBASIC2.35□□□□□ -2.03
RTCAO00442 AC092794.1-201ENST00000612734 582 ntBASIC2.35□□□□□ -2.03
RTCAO00442 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.35□□□□□ -2.03
RTCAO00442 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.35□□□□□ -2.03
RTCAO00442 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.35□□□□□ -2.03
RTCAO00442 AC069528.2-201ENST00000624849 1991 ntBASIC2.35□□□□□ -2.03
RTCAO00442 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTCAO00442 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.35□□□□□ -2.03
RTCAO00442 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.35□□□□□ -2.03
RTCAO00442 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTCAO00442 OR4G1P-203ENST00000641984 1631 ntBASIC2.35□□□□□ -2.03
RTCAO00442 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
RTCAO00442 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTCAO00442 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.03
RTCAO00442 Y_RNA.38-201ENST00000362617 102 ntBASIC2.34□□□□□ -2.03
RTCAO00442 Y_RNA.89-201ENST00000363031 102 ntBASIC2.34□□□□□ -2.03
RTCAO00442 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
RTCAO00442 RNU6-266P-201ENST00000364225 107 ntBASIC2.34□□□□□ -2.03
RTCAO00442 RNU6-1303P-201ENST00000364841 107 ntBASIC2.34□□□□□ -2.03
RTCAO00442 POLHP1-201ENST00000411806 470 ntBASIC2.34□□□□□ -2.03
RTCAO00442 OR9R1P-201ENST00000412200 877 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms