Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR4424-201ENST00000585257 86 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL391813.1-201ENST00000603098 260 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL355598.1-201ENST00000604169 202 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AF250324.2-201ENST00000608299 610 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SCARNA17.4-201ENST00000614296 143 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 UCA1.1-201ENST00000620952 75 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL359880.1-201ENST00000621879 266 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 YWHAEP7-203ENST00000622054 312 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SEPT14P19-203ENST00000633205 211 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC010889.1-201ENST00000566193 2666 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.3-201ENST00000362331 103 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-942P-201ENST00000363002 107 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORD14B-201ENST00000364533 90 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-116P-201ENST00000384042 109 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1127P-201ENST00000384580 107 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC016831.2-201ENST00000417179 352 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTCYBP8-201ENST00000422855 651 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC004383.1-201ENST00000438135 289 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC003071.1-201ENST00000451219 789 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL583843.1-201ENST00000456070 346 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC022364.2-201ENST00000457963 554 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU7-180P-201ENST00000459240 63 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC006512.1-201ENST00000468816 291 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTND3P25-201ENST00000509243 135 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 MRPS36P2-201ENST00000512569 299 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC105417.1-201ENST00000514691 285 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-581P-201ENST00000516214 105 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORA31.6-201ENST00000516241 130 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-835P-201ENST00000516974 104 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP003034.1-201ENST00000534621 422 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 NACAP3-201ENST00000552100 481 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC007375.1-201ENST00000554513 578 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR5583-1-201ENST00000580941 59 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR548AC-201ENST00000585049 88 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC015540.1-201ENST00000615828 501 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL158209.2-201ENST00000619266 216 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL162373.1-201ENST00000620433 407 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC098657.3-201ENST00000620434 263 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 DUXAP9-208ENST00000622815 614 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR6863-201ENST00000636112 90 ntBASIC1.84□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL359851.1-201ENST00000569460 4997 ntBASIC1.84□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-715P-201ENST00000365204 103 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-898P-201ENST00000365627 104 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 SNORA16.2-201ENST00000390991 127 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 MTCO3P40-201ENST00000392516 676 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 Y_RNA.623-201ENST00000411128 95 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-607P-201ENST00000411283 108 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 RPL21P90-201ENST00000415692 466 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC016691.1-201ENST00000441321 413 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL078601.1-201ENST00000444542 271 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC011005.2-201ENST00000487324 359 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC107401.1-201ENST00000503426 685 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 CCDC34P1-201ENST00000507441 517 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC009646.1-201ENST00000510455 318 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC00933-203ENST00000559812 219 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL138889.2-201ENST00000603883 242 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AL670379.4-201ENST00000605279 254 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 RMST_4.1-201ENST00000616886 107 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 U6.99-201ENST00000637524 83 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 AC099654.12-201ENST00000639868 649 ntBASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TMX2-CTNND1H3BSU7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TMX2-CTNND1H3BSU7 MIR412-201ENST00000362142 91 ntBASIC1.82□□□□□ -2.12
TMX2-CTNND1H3BSU7 RNU6-552P-201ENST00000362869 119 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms