Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RAP1BP3-201ENST00000407180 549 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 CYCSP49-201ENST00000420810 319 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC245047.4-201ENST00000433189 144 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC099677.2-201ENST00000436385 175 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 PGBD4P5-201ENST00000445958 426 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 ART2BP-201ENST00000453501 499 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC114982.1-201ENST00000469402 321 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU2-10P-201ENST00000516375 211 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU5A-4P-201ENST00000516588 111 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC123904.2-201ENST00000548059 300 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 VN1R80P-201ENST00000597126 338 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AL606834.3-201ENST00000602615 496 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AL590229.1-201ENST00000603497 542 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AL359547.2-201ENST00000615810 418 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 RMST_7.1-201ENST00000621935 268 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR449A-201ENST00000362113 91 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU4-15P-201ENST00000362613 141 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU1-22P-201ENST00000363334 158 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RNY4P16-201ENST00000364768 94 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU4-22P-201ENST00000411058 166 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RPS15AP12-201ENST00000419498 388 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 SNRPEP10-201ENST00000420249 274 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 SNRPEP8-201ENST00000442866 260 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC132479.1-201ENST00000449160 144 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 snoU13.30-201ENST00000458951 104 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 UBE2DNL-203ENST00000474922 222 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 HMGN2P9-201ENST00000476875 229 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RPS23P4-201ENST00000487908 423 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC145146.1-201ENST00000496370 254 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-276P-201ENST00000516114 96 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AL512310.8-201ENST00000550183 120 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC069114.2-201ENST00000604699 304 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC018889.1-201ENST00000605372 397 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AL158032.1-201ENST00000605401 106 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC144521.1-201ENST00000607148 956 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC026585.1-201ENST00000619582 524 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 AC131159.1-201ENST00000621854 213 ntBASIC0.62□□□□□ -2.31
TRAV12-1A0A0B4J245 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-78P-201ENST00000362897 107 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-968P-201ENST00000384076 107 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-331P-201ENST00000384724 107 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR544A-201ENST00000384855 91 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR146A-201ENST00000385201 99 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 MTCO3P41-201ENST00000414801 328 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL031779.1-201ENST00000415663 330 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC087343.1-201ENST00000477341 475 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL163195.1-201ENST00000496941 348 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-351P-201ENST00000516097 100 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 RNA5SP481-201ENST00000516814 122 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 MTND3P19-201ENST00000603825 345 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL365434.2-201ENST00000607979 234 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC104073.3-201ENST00000610942 955 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC106800.4-201ENST00000614905 153 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AP002782.1-201ENST00000623107 614 ntBASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
TRAV12-1A0A0B4J245 AL445523.1-201ENST00000451184 1362 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU1-124P-201ENST00000363861 145 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 SNORA70B-201ENST00000384210 135 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-1222P-201ENST00000384615 107 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR515-2-201ENST00000384883 83 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR515-1-201ENST00000384884 83 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR194-1-201ENST00000384892 85 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 AC019070.1-201ENST00000415008 1024 ntBASIC0.6□□□□□ -2.31
TRAV12-1A0A0B4J245 MTND4P20-201ENST00000424125 869 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms