Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 MRPL50P4-201ENST00000446432 475 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AC080013.2-201ENST00000460866 323 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 RPS26P21-201ENST00000475397 348 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 MTND5P5-201ENST00000503764 376 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 SNORA25.11-201ENST00000515935 105 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 RNA5SP217-201ENST00000515959 91 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 CPDP1-201ENST00000579660 283 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AC105245.1-201ENST00000581934 244 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 AL161423.1-201ENST00000613700 262 ntBASIC3.55□□□□□ -1.84
COL4A3BPQ9Y5P4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-655P-201ENST00000362858 107 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-529P-201ENST00000363383 104 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-43P-201ENST00000384302 107 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR218-1-201ENST00000384999 110 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR517A-201ENST00000385001 87 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR548F5-201ENST00000408421 86 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 RPL30P4-201ENST00000429309 333 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AC104332.2-201ENST00000429959 156 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AC093019.1-201ENST00000443135 252 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 POLR3GP2-201ENST00000588366 668 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AC005000.2-201ENST00000605468 310 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR8076-201ENST00000611401 83 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 uc_338.25-201ENST00000613756 156 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 AP000560.1-201ENST00000624150 1937 ntBASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A3BPQ9Y5P4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-525P-201ENST00000363685 104 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 SET-203ENST00000372688 801 ntTSL 2 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR521-1-201ENST00000384902 87 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AL356432.1-201ENST00000405809 419 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 RPL37P10-201ENST00000412884 288 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 EIF4EP4-201ENST00000424916 578 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 MTND3P9-201ENST00000429526 346 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 UBBP3-201ENST00000445497 241 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 SNRPGP7-201ENST00000469016 106 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AC091951.2-201ENST00000500762 203 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ACA59.1-201ENST00000515966 143 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-875P-201ENST00000516488 106 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AL356280.1-201ENST00000603614 379 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AL449363.1-201ENST00000617815 186 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AL159153.1-201ENST00000619688 317 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AC018692.3-201ENST00000623929 123 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 AC099654.5-201ENST00000636479 350 ntBASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
COL4A3BPQ9Y5P4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC009541.1-201ENST00000438279 2662 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR128-1-201ENST00000384921 82 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 SNORA48.2-201ENST00000390926 124 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RN7SKP158-201ENST00000410453 326 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RN7SKP61-201ENST00000410642 295 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RPL32P35-201ENST00000415214 394 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RPL23AP95-201ENST00000426806 265 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC078809.1-201ENST00000427601 140 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC092427.1-202ENST00000430569 476 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RPS3AP52-201ENST00000435639 297 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC016632.1-201ENST00000503994 196 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC116337.1-201ENST00000509680 687 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RN7SKP24-201ENST00000515888 284 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU2-53P-201ENST00000516257 147 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-56P-201ENST00000516986 93 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms