Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PCDHGA4Q9Y5G9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AL139811.1-201ENST00000424779 2299 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AL022322.2-201ENST00000624072 20397 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 Y_RNA.78-201ENST00000362970 110 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 U3.15-201ENST00000365398 212 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6-1181P-201ENST00000384191 106 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AC092017.2-201ENST00000427600 362 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 HMGN2P10-201ENST00000448085 265 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AC023449.1-201ENST00000454464 154 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AC107297.1-201ENST00000459991 176 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AC092754.1-201ENST00000472975 479 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6-113P-201ENST00000516653 101 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 SCARNA20.4-201ENST00000516969 131 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AL365205.2-201ENST00000594586 68 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AL020997.2-201ENST00000602607 184 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 AC093732.2-201ENST00000607950 274 ntBASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA4Q9Y5G9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU1-43P-201ENST00000365052 165 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR1255A-201ENST00000408338 113 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 U3.36-201ENST00000408418 213 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AC093162.1-201ENST00000419682 124 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 RPL7AP49-201ENST00000429522 581 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AL591438.1-201ENST00000433508 581 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AL121890.1-201ENST00000435457 205 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 SCARNA10-201ENST00000459255 330 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AC083906.5-201ENST00000503722 328 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 AP004607.2-201ENST00000533949 322 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR5009-201ENST00000578736 100 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 SNRPGP15-201ENST00000600149 222 ntBASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PCDHGA4Q9Y5G9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6-972P-201ENST00000391208 107 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC007064.1-201ENST00000412238 351 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 TOMM22P1-201ENST00000418578 312 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 RPS29P22-201ENST00000472363 168 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC083982.1-201ENST00000485679 344 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC078817.1-201ENST00000492623 435 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 RNA5SP236-201ENST00000516169 116 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR4480-201ENST00000582492 71 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 MIR7853-201ENST00000584820 132 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AL137067.1-201ENST00000615933 120 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 BX005214.3-202ENST00000619809 325 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC068254.2-201ENST00000623938 3577 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 AC104623.2-202ENST00000623477 4002 ntBASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA4Q9Y5G9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 MAPK10-304ENST00000641341 3984 ntBASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
PCDHGA4Q9Y5G9 Y_RNA.244-201ENST00000364484 109 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms