Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC022655.2-201ENST00000577280 318 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 MIR3144-201ENST00000579460 79 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC004832.4-201ENST00000608952 331 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC104465.1-201ENST00000611365 139 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC068831.7-201ENST00000616954 363 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 MIR6500-201ENST00000622700 86 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.65□□□□□ -1.67
NOD1Q9Y239 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOD1Q9Y239 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOD1Q9Y239 AC018529.3-201ENST00000624212 2254 ntBASIC4.65□□□□□ -1.67
NOD1Q9Y239 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.65□□□□□ -1.67
NOD1Q9Y239 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.65□□□□□ -1.67
NOD1Q9Y239 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 MTND5P35-201ENST00000557537 1720 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 RNU6-1285P-201ENST00000363480 105 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 RNA5SP390-201ENST00000410191 113 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 BPY2DP-201ENST00000422208 265 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 AC019205.3-201ENST00000424573 156 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 AL358232.1-201ENST00000448030 501 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 AC108022.1-201ENST00000493466 478 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 MTND5P41-201ENST00000517498 206 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 AP005660.1-201ENST00000522972 293 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 MIR5685-201ENST00000579080 79 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 AC090897.2-201ENST00000581715 130 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 RPL7P50-201ENST00000600588 727 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 MIR6075-201ENST00000620782 95 ntBASIC4.64□□□□□ -1.67
NOD1Q9Y239 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NOD1Q9Y239 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NOD1Q9Y239 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
NOD1Q9Y239 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NOD1Q9Y239 Y_RNA.179-201ENST00000363844 90 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 RNU6-270P-201ENST00000364131 105 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 RNA5SP372-201ENST00000390836 115 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 MIR1911-201ENST00000410783 80 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 HSPE1P12-201ENST00000412576 301 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC024067.1-201ENST00000426199 223 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC074133.1-201ENST00000515696 183 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 SNORA31.16-201ENST00000516773 139 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 ACA59.2-201ENST00000517061 156 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 CYCSP23-201ENST00000519781 313 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC006064.5-201ENST00000541782 248 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC018448.1-201ENST00000552843 316 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NOD1Q9Y239 MIR4308-201ENST00000580634 81 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AL713866.2-201ENST00000603579 219 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC024220.1-201ENST00000603675 484 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 MIR8069-1-201ENST00000616627 86 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 MIR8069-2-201ENST00000621412 86 ntBASIC4.63□□□□□ -1.67
NOD1Q9Y239 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NOD1Q9Y239 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NOD1Q9Y239 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NOD1Q9Y239 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NOD1Q9Y239 RBBP8P1-201ENST00000449447 1844 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC073073.2-201ENST00000609827 2578 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC110491.1-201ENST00000562191 2010 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NOD1Q9Y239 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC007656.2-201ENST00000624902 4547 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.62□□□□□ -1.67
NOD1Q9Y239 RNU6-704P-201ENST00000364162 103 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 Y_RNA.217-201ENST00000364214 105 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 Y_RNA.304-201ENST00000365011 112 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 Y_RNA.435-201ENST00000384095 112 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 RNU6-622P-201ENST00000384272 103 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 Y_RNA.498-201ENST00000384460 102 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 MIR1179-201ENST00000408703 91 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 RNU6-394P-201ENST00000410735 107 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 AL691449.1-201ENST00000426570 421 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 Y_RNA.641-201ENST00000459414 105 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 RNU6-1219P-201ENST00000516143 112 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 RNU6-966P-201ENST00000516479 104 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC006199.1-201ENST00000548728 219 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.62□□□□□ -1.67
NOD1Q9Y239 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC008739.3-201ENST00000603262 127 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 CR392039.5-201ENST00000623201 510 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 AC126323.6-202ENST00000568092 3511 ntBASIC4.62□□□□□ -1.67
NOD1Q9Y239 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms