Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 SNORD116-11-201ENST00000383882 92 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RNU6-128P-201ENST00000383976 107 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RNU6-658P-201ENST00000384606 106 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 MIR9-1-201ENST00000385198 89 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 NCOR1P3-201ENST00000420479 303 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RPL7P37-201ENST00000425095 738 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AL359672.1-201ENST00000442302 409 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RPL26P9-201ENST00000457466 433 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RN7SL633P-201ENST00000488974 297 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RPS29P20-201ENST00000489592 171 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AC092185.1-201ENST00000491371 97 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 MTCO1P29-201ENST00000496868 288 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AC008526.1-201ENST00000509149 338 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RNU6-566P-201ENST00000516790 107 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 RNA5SP454-201ENST00000517231 127 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AP005639.2-201ENST00000527592 928 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AC025281.1-201ENST00000567026 265 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AC104237.2-201ENST00000612456 443 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 UCA1.1-201ENST00000620952 75 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 U6.99-201ENST00000637524 83 ntBASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC9Q9UKV0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HDAC9Q9UKV0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 MIR518D-201ENST00000385014 87 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 MIR34A-201ENST00000385130 110 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 MIR548K-201ENST00000408406 116 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 PGBD4P6-201ENST00000421501 610 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC098831.1-201ENST00000440661 216 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 MTND1P17-201ENST00000448961 204 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 snoU13.23-201ENST00000458863 104 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC026801.1-201ENST00000497178 464 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 RNU6-1332P-201ENST00000516666 104 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC025423.5-201ENST00000550230 219 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 MIR4782-201ENST00000577987 79 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC100830.2-201ENST00000581636 240 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 HMGN2P15-201ENST00000585707 270 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 RNU6-85P-201ENST00000605989 107 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC069234.5-201ENST00000611056 416 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 Z69720.2-201ENST00000624755 279 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 AC026241.1-201ENST00000517873 2142 ntBASIC3.4□□□□□ -1.87
HDAC9Q9UKV0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 Y_RNA.238-201ENST00000364441 102 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 SNORA46-201ENST00000384762 135 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AL138827.1-201ENST00000402666 306 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AL356057.2-201ENST00000403318 432 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 RNA5SP247-201ENST00000411181 105 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC245054.2-201ENST00000415639 319 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 BX276092.3-201ENST00000424182 230 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 MTND4P17-201ENST00000470444 350 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 RPL31P41-201ENST00000477967 372 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 MTND5P5-201ENST00000503764 376 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC093027.1-201ENST00000546698 429 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 POLR3GP2-201ENST00000588366 668 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
HDAC9Q9UKV0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 MIR548F5-201ENST00000408421 86 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 RNA5SP492-201ENST00000411330 114 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AL096701.2-201ENST00000416920 238 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 RPS26P21-201ENST00000475397 348 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AC092436.3-201ENST00000511788 257 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 AC092608.2-201ENST00000624427 218 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 MIR1302-1-201ENST00000637932 143 ntBASIC3.38□□□□□ -1.87
HDAC9Q9UKV0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms