Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC016831.2-201ENST00000417179 352 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 Z99497.1-201ENST00000421282 135 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 SNRPFP4-201ENST00000456366 242 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 RN7SKP265-201ENST00000516448 223 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AP005660.1-201ENST00000522972 293 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 CR383656.8-201ENST00000549046 145 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AL451064.1-201ENST00000607718 471 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AC027514.1-201ENST00000588561 1603 ntBASIC1.88□□□□□ -2.11
CTNNA3Q9UI47 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 RNU5F-6P-201ENST00000362979 116 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 SNORD56.2-201ENST00000363242 71 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 Y_RNA.224-201ENST00000364308 111 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 Y_RNA.327-201ENST00000365201 102 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 RNU6-546P-201ENST00000383991 107 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 RNU6-611P-201ENST00000384276 104 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 SNORD14D-201ENST00000384390 87 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 RNU6-843P-201ENST00000384454 104 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AL627311.1-201ENST00000431514 115 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 RPL23AP30-201ENST00000432419 501 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 Y_RNA.689-201ENST00000516589 107 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC022878.1-201ENST00000530684 149 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC025678.1-201ENST00000567861 338 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 MIR5697-201ENST00000578045 78 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC004908.3-201ENST00000610248 625 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC004223.4-201ENST00000612426 332 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 AC007671.2-201ENST00000637344 619 ntBASIC1.87□□□□□ -2.11
CTNNA3Q9UI47 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 MIR126-201ENST00000362291 85 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 SNORA75B-201ENST00000384053 137 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 Y_RNA.623-201ENST00000411128 95 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AC004965.1-201ENST00000413033 213 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AL365338.1-201ENST00000422282 858 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 UBE2V1P4-201ENST00000425374 344 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 MED13P1-201ENST00000428342 171 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AL590365.1-201ENST00000450788 243 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AL583843.1-201ENST00000456070 346 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 PRELID3BP1-201ENST00000457142 540 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 HMGB1P30-201ENST00000492455 606 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 SNORA3.4-201ENST00000515969 96 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AC092325.1-201ENST00000566449 554 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AC022022.2-201ENST00000602989 360 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 uc_338.5-201ENST00000611839 155 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 MTND5P10-201ENST00000603719 1809 ntBASIC1.86□□□□□ -2.11
CTNNA3Q9UI47 RNU6-655P-201ENST00000362858 107 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 RNU6-942P-201ENST00000363002 107 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 MIR1262-201ENST00000408276 93 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AMD1P1-201ENST00000457220 922 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AC010587.1-201ENST00000505809 469 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 RNU6-1129P-201ENST00000515964 104 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AC103987.3-201ENST00000582071 292 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AC234772.3-201ENST00000602277 528 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AC012065.4-201ENST00000602445 679 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 AL139286.2-201ENST00000606838 396 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 MIR6504-201ENST00000613520 61 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CTNNA3Q9UI47 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 U8.3-201ENST00000363321 132 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 RNU6-529P-201ENST00000363383 104 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 RNU6-392P-201ENST00000364926 101 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 MIR558-201ENST00000384920 94 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms