Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 RPL23AP36-201ENST00000413895 458 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 HMGN2P31-201ENST00000432430 273 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 RPS15AP5-201ENST00000436276 388 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 AC010095.1-201ENST00000443543 144 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 AP000705.1-201ENST00000454567 350 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 AC090525.1-201ENST00000479116 478 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 SNORA25.14-201ENST00000516481 132 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.683-201ENST00000516508 93 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 RPL23AP97-201ENST00000568955 471 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 LINC00901.1-201ENST00000617252 152 ntBASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.45□□□□□ -1.7
CXXC1Q9P0U4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.331-201ENST00000365267 102 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 RNU6-886P-201ENST00000384319 105 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 RNU6-378P-201ENST00000384324 107 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 RNU6-748P-201ENST00000384648 107 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 MIR320B2-201ENST00000408479 138 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 AC138623.1-201ENST00000418060 216 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 POLR2KP2-201ENST00000438155 177 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 COX6CP14-201ENST00000469580 174 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 AP002884.2-201ENST00000471647 395 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 RPS29P2-201ENST00000479278 136 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 SNORA31.16-201ENST00000516773 139 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 AC024405.2-202ENST00000532731 184 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 AC026470.2-201ENST00000561492 181 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 CYP4A27P-201ENST00000567218 190 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 AC008749.1-201ENST00000597650 306 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 Z83818.1-201ENST00000603584 150 ntBASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.44□□□□□ -1.7
CXXC1Q9P0U4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 SNORA72.2-201ENST00000365028 127 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 SNORA46.1-201ENST00000391069 153 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.590-201ENST00000410140 107 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AC245291.1-201ENST00000419501 328 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 MTCO1P5-201ENST00000433573 344 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 SETP5-201ENST00000437270 562 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AC007395.1-201ENST00000451333 677 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 RPL23AP94-201ENST00000512518 302 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.679-201ENST00000516416 91 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AP002392.1-201ENST00000537692 208 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AL356575.1-201ENST00000603008 283 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 SNORD98-201ENST00000636377 67 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 ZNF204P-201ENST00000416749 2397 ntBASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.43□□□□□ -1.7
CXXC1Q9P0U4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 MIR410-201ENST00000362222 80 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.76-201ENST00000362931 109 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 Y_RNA.179-201ENST00000363844 90 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 RNU6-740P-201ENST00000364734 105 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 UQCRBP2-201ENST00000447827 297 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AC026784.1-201ENST00000507986 352 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AC074133.1-201ENST00000515696 183 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 CBX3P4-201ENST00000538909 354 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 CYCSP30-201ENST00000546447 172 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AL078605.1-201ENST00000603529 500 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 AL162713.1-201ENST00000604480 262 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 MIR8069-1-201ENST00000616627 86 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 MIR8069-2-201ENST00000621412 86 ntBASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CXXC1Q9P0U4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms