Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 U4.7-201ENST00000638126 106 ntBASIC3.21□□□□□ -1.9
EHD3Q9NZN3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
EHD3Q9NZN3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.21□□□□□ -1.9
EHD3Q9NZN3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR148B-201ENST00000362252 99 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 SNORA71.3-201ENST00000362582 128 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 Y_RNA.39-201ENST00000362620 98 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 Y_RNA.577-201ENST00000384794 101 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR518D-201ENST00000385014 87 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 SNORD17-201ENST00000390930 237 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AL138885.1-201ENST00000405921 675 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 U3.37-201ENST00000408528 213 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AL356968.1-201ENST00000416622 474 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MTCYBP9-201ENST00000431021 303 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AC098831.1-201ENST00000440661 216 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 RPS29P27-201ENST00000463711 170 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 RPL21P129-201ENST00000491732 478 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AC007458.1-201ENST00000542812 373 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 HSBP1P1-201ENST00000555205 166 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR3671-201ENST00000580455 88 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AC008962.1-201ENST00000605729 304 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR1244-1-201ENST00000612829 85 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR1244-3-201ENST00000635744 85 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR4272-201ENST00000635924 64 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR1244-2-201ENST00000636449 85 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 MIR1244-4-202ENST00000636813 85 ntBASIC3.2□□□□□ -1.9
EHD3Q9NZN3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
EHD3Q9NZN3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AL049781.1-201ENST00000623195 3585 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 SNORD50.1-201ENST00000362987 71 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 RNA5SP197-201ENST00000363357 119 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 RNU4-42P-201ENST00000364738 142 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 HMGN2P30-201ENST00000423237 256 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 MTATP6P7-201ENST00000453315 681 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 U8.20-201ENST00000459445 131 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 RPS29P20-201ENST00000489592 171 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 MTCO2P24-201ENST00000515611 426 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC104027.1-201ENST00000521887 300 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 MIR5696-201ENST00000578474 85 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC078899.3-201ENST00000599065 212 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AL355598.1-201ENST00000604169 202 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 MIR92B-201ENST00000607575 96 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC097372.5-201ENST00000623665 376 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 SCARNA4-202ENST00000625402 129 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.19□□□□□ -1.9
EHD3Q9NZN3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
EHD3Q9NZN3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 MTND5P9-201ENST00000503854 1755 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
EHD3Q9NZN3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 RNU6-823P-201ENST00000391042 103 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 RPL26P27-201ENST00000414397 437 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 DPH3P2-201ENST00000422618 250 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 EIF4EP2-201ENST00000422816 654 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 YME1L1P1-201ENST00000429435 297 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
EHD3Q9NZN3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms