Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.88
TFCP2L1Q9NZI6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.128-201ENST00000363391 112 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6-1059P-201ENST00000363752 98 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 MIR181A2-201ENST00000384863 110 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 MIR27B-201ENST00000385129 97 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 MIR548P-201ENST00000408336 84 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RNU2-33P-201ENST00000410344 192 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 DPH3P2-201ENST00000422618 250 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 GPM6BP2-201ENST00000432046 144 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AL359672.1-201ENST00000442302 409 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 GPM6BP1-201ENST00000446387 144 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC003982.1-202ENST00000469928 248 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RPS27AP9-201ENST00000477681 438 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RPL7P42-201ENST00000481005 679 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AL160314.1-201ENST00000490836 438 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6-120P-201ENST00000516077 103 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.670-201ENST00000516255 105 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6-143P-201ENST00000516942 93 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RNA5SP290-201ENST00000517133 127 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC087854.1-201ENST00000519706 414 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC026371.1-201ENST00000551867 419 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AC040896.1-201ENST00000613819 479 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AL669831.3-213ENST00000636676 183 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 AP001148.1-201ENST00000624124 2359 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 KPNA2P1-201ENST00000458289 1591 ntBASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TFCP2L1Q9NZI6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.33-201ENST00000362591 102 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.187-201ENST00000363918 113 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.324-201ENST00000365165 102 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 YPEL5P1-201ENST00000419731 367 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 MTND2P23-201ENST00000422990 651 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 SNAP23P1-201ENST00000433229 246 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 MIR2053-201ENST00000459295 91 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC079140.5-201ENST00000507882 310 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 MTCYBP40-201ENST00000509390 1135 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC008716.1-201ENST00000511084 513 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC025755.1-201ENST00000521306 278 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 CASP1P1-201ENST00000526345 212 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AL442663.2-201ENST00000554385 511 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AL360085.1-201ENST00000604713 532 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC009229.3-201ENST00000608056 282 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 PART1_1.1-201ENST00000611761 217 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC010378.1-201ENST00000619270 362 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 AC098657.3-201ENST00000620434 263 ntBASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TFCP2L1Q9NZI6 ZNF72P-201ENST00000425869 1908 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.151-201ENST00000363566 112 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6-128P-201ENST00000383976 107 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6-692P-201ENST00000384496 107 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 PGBD4P6-201ENST00000421501 610 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 PMCHL1-202ENST00000423102 261 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 USP9YP30-201ENST00000430729 455 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 AC092573.2-201ENST00000434546 243 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 ELOCP24-201ENST00000456370 334 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.631-201ENST00000459607 101 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RPS23P3-201ENST00000470993 430 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 AL135752.1-201ENST00000479477 471 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 AC011005.2-201ENST00000487324 359 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RN7SL636P-201ENST00000497504 294 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 AC116337.1-201ENST00000509680 687 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 Y_RNA.711-201ENST00000516993 102 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 RNA5SP165-201ENST00000517142 115 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 AP000654.2-201ENST00000605633 586 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.31□□□□□ -1.88
TFCP2L1Q9NZI6 uc_338.22-201ENST00000622722 187 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms