Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RPS29P26-201ENST00000477483 171 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RPL7P43-201ENST00000478876 753 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC008628.2-201ENST00000502605 298 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-581P-201ENST00000516214 105 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-323P-201ENST00000521915 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.37□□□□□ -2.03
NDE1Q9NXR1 PSMA3P-201ENST00000555485 635 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 MIR4325-201ENST00000583049 90 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 MIR3942-201ENST00000585264 109 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC011712.1-201ENST00000588959 234 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC021646.1-201ENST00000605469 484 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-6P-201ENST00000606623 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NDE1Q9NXR1 FAM157A-202ENST00000615155 405 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC004944.1-201ENST00000517807 3059 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 ADAM3A-203ENST00000461344 2157 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.279-201ENST00000364763 95 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 RNU1-140P-201ENST00000365040 165 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 SNORD73A-201ENST00000386062 65 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 WARS2P1-201ENST00000429678 537 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC009296.1-201ENST00000443146 155 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC104389.3-201ENST00000445629 235 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 RPL7P12-201ENST00000446719 750 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 BTF3P15-201ENST00000455606 336 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 HMGN1P12-201ENST00000499125 195 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC025423.5-201ENST00000550230 219 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 MIR3124-201ENST00000582636 67 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 OR1M4P-201ENST00000589199 287 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 APOOP1-201ENST00000604695 592 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 YPEL5P2-201ENST00000605553 359 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC010680.1-201ENST00000590024 3590 ntBASIC2.36□□□□□ -2.03
NDE1Q9NXR1 AC110491.1-201ENST00000562191 2010 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC121333.1-201ENST00000567488 2709 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.72-201ENST00000362894 103 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 RNU7-23P-201ENST00000459465 62 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC128713.1-201ENST00000471495 306 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC096725.1-201ENST00000514266 313 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC006199.1-201ENST00000548728 219 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AL121821.2-201ENST00000556081 394 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC021739.1-201ENST00000559631 174 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 LINC00933-203ENST00000559812 219 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC026464.5-201ENST00000562497 722 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.35□□□□□ -2.03
NDE1Q9NXR1 MIR4742-201ENST00000581069 85 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 MIR3941-201ENST00000582572 103 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 RNU6-85P-201ENST00000605989 107 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC010378.1-201ENST00000619270 362 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC092794.2-201ENST00000620933 563 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AC138627.2-201ENST00000624202 601 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 AL133216.2-202ENST00000634512 349 ntBASIC2.35□□□□□ -2.03
NDE1Q9NXR1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 RNA5SP374-201ENST00000362939 125 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 RNU6-254P-201ENST00000363377 107 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 SNORA18.3-201ENST00000384122 132 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 RNU6-767P-201ENST00000384132 107 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 RNU6-72P-201ENST00000384285 79 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 MIR34A-201ENST00000385130 110 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 MIR450B-201ENST00000401182 78 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.604-201ENST00000410574 102 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 RPL35AP12-201ENST00000425362 338 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 TOMM20P4-201ENST00000427861 435 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AC098614.3-201ENST00000438957 440 ntBASIC2.34□□□□□ -2.03
NDE1Q9NXR1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms