Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 SNORA4.4-201ENST00000515921 135 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-377P-201ENST00000515965 102 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC109479.2-201ENST00000517842 174 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC034114.1-201ENST00000520293 285 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 HIF1AP1-201ENST00000553642 175 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC233702.2-202ENST00000562547 291 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 MIR3126-201ENST00000577443 74 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 MIR3611-201ENST00000584484 83 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC091135.1-201ENST00000585943 307 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC007684.1-201ENST00000609671 477 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC009090.3-201ENST00000616553 565 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC097372.5-201ENST00000623665 376 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 AC090517.3-201ENST00000625170 141 ntBASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.13□□□□□ -2.07
ZCCHC3Q9NUD5 MTND4P14-201ENST00000435799 1354 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 Y_RNA.1-201ENST00000352915 104 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-1158P-201ENST00000391167 107 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 MTCYBP8-201ENST00000422855 651 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AC013470.1-201ENST00000453438 462 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AL353752.1-201ENST00000454946 260 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 RNU7-180P-201ENST00000459240 63 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 RN7SKP256-201ENST00000517201 314 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AC022880.1-201ENST00000534017 973 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 PIGPP4-201ENST00000584447 307 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 ELOCP5-201ENST00000604924 333 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AC002044.1-201ENST00000606707 158 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 AC243829.7-201ENST00000633081 225 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
ZCCHC3Q9NUD5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AL354685.2-201ENST00000448218 1447 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-266P-201ENST00000364225 107 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-996P-201ENST00000365438 107 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-1222P-201ENST00000384615 107 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 MIR544A-201ENST00000384855 91 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 USP9YP18-201ENST00000425912 695 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AC243964.1-201ENST00000441814 261 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AL163973.1-201ENST00000484753 577 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 MIR5583-1-201ENST00000580941 59 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 MIR3941-201ENST00000582572 103 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AC091805.2-201ENST00000603848 235 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 APOOP1-201ENST00000604695 592 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AL670379.2-201ENST00000604983 252 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 AC022202.1-201ENST00000613515 211 ntBASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
ZCCHC3Q9NUD5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 SNORA80E-201ENST00000384744 137 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 RNU2-48P-201ENST00000410694 191 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC018634.1-201ENST00000437554 401 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 RNU7-167P-201ENST00000459160 62 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 COPS8P3-201ENST00000526024 482 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AP001893.2-201ENST00000526949 202 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC004223.2-201ENST00000590309 544 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AC017083.3-201ENST00000609955 700 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 AL354950.2-201ENST00000617939 290 ntBASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
ZCCHC3Q9NUD5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 Y_RNA.51-201ENST00000362725 102 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms