Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 OR56A5-201ENST00000340110 738 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 RNU6-1085P-201ENST00000363576 107 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 SNORA67.1-201ENST00000364749 141 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 SNORA69-201ENST00000383895 132 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 Y_RNA.399-201ENST00000383955 105 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 RNU6-622P-201ENST00000384272 103 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 OR9R1P-201ENST00000412200 877 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC012308.1-201ENST00000451232 178 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AL163973.1-201ENST00000484753 577 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 RNU6-835P-201ENST00000516974 104 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 HIF1AP1-201ENST00000553642 175 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AL512360.1-201ENST00000555346 234 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC104984.5-201ENST00000586878 94 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 AC093788.1-201ENST00000609356 927 ntBASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SMC4Q9NTJ3 MTND4P14-201ENST00000435799 1354 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 Y_RNA.255-201ENST00000364581 97 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 SNORD116-20-201ENST00000384529 92 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 SNORA80E-201ENST00000384744 137 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 SNORA16.2-201ENST00000390991 127 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 Z82209.1-201ENST00000422141 2135 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 OOSP1P1-201ENST00000423265 274 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 RNU6-261P-201ENST00000459506 102 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 AC112771.1-201ENST00000463581 102 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 AC083798.1-201ENST00000472671 131 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 AC090096.1-201ENST00000489168 390 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 RNA5SP401-201ENST00000515920 127 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 RNU2-69P-201ENST00000516061 100 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC4Q9NTJ3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.9□□□□□ -1.94
SMC4Q9NTJ3 AC131280.1-202ENST00000624067 4211 ntBASIC2.9□□□□□ -1.94
SMC4Q9NTJ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SMC4Q9NTJ3 SNORD114-19-201ENST00000363072 75 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 SNORD70.1-201ENST00000391007 85 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 RNU6-192P-201ENST00000391253 100 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AL590002.1-201ENST00000406554 418 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 RNA5SP390-201ENST00000410191 113 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 Y_RNA.599-201ENST00000410489 109 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 RNU7-26P-201ENST00000458980 63 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 SCARNA18-201ENST00000459004 134 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 RNU7-180P-201ENST00000459240 63 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AP001025.1-201ENST00000486139 332 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 CCDC34P1-201ENST00000507441 517 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 MTCYBP40-201ENST00000509390 1135 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 SNORA31.23-201ENST00000517219 133 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 BNIP3P6-201ENST00000549284 499 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 AC084782.3-201ENST00000612282 578 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 HMGB1P24-202ENST00000615653 685 ntBASIC2.9□□□□□ -1.95
SMC4Q9NTJ3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 RNU6-78P-201ENST00000362897 107 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 RNU6-1322P-201ENST00000364309 107 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 Y_RNA.481-201ENST00000384373 102 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 MIR144-201ENST00000384886 86 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 AC074117.2-201ENST00000417130 397 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 EIF4EP4-201ENST00000424916 578 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 HMGB1P31-201ENST00000437242 427 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 PRPS1P1-201ENST00000445305 876 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 RPL7P12-201ENST00000446719 750 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 SMURF2P1-201ENST00000514992 481 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 IGLV3-17-201ENST00000519099 244 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 AC087241.2-201ENST00000535801 324 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 HMGB1P33-201ENST00000563485 527 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 AL590808.1-201ENST00000618696 141 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 AC068137.3-201ENST00000639191 341 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 AC073869.6-201ENST00000640656 341 ntBASIC2.89□□□□□ -1.95
SMC4Q9NTJ3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms