Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 OR1M4P-201ENST00000589199 287 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 AL121917.1-203ENST00000605534 577 ntBASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR1BQ9H9Y6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-859P-201ENST00000362728 107 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-461P-201ENST00000364195 107 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 Y_RNA.530-201ENST00000384587 101 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AL591043.1-201ENST00000432461 424 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC124916.1-201ENST00000444020 547 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC087884.1-201ENST00000469738 328 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RPL36AP48-201ENST00000485521 314 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RPL23AP49-201ENST00000492925 468 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 SCARNA3-201ENST00000517097 143 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AP002770.2-201ENST00000543613 532 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RPS15AP11-201ENST00000594193 385 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 BNIP3P25-201ENST00000596023 559 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC107304.1-201ENST00000604229 296 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 AC123912.5-201ENST00000605470 343 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-85P-201ENST00000605989 107 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 MIR3662-201ENST00000637030 95 ntBASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1BQ9H9Y6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-622P-201ENST00000384272 103 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 RNU6-1106P-201ENST00000390845 107 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 U6atac.2-201ENST00000408644 118 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC009161.1-201ENST00000417306 376 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 USP9YP20-201ENST00000419224 558 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC097463.2-201ENST00000421074 142 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 ARL5AP4-201ENST00000430731 512 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 Z98742.2-201ENST00000431564 187 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC080013.2-201ENST00000460866 323 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC117503.1-201ENST00000472241 394 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 YWHAEP4-201ENST00000505390 198 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 Y_RNA.665-201ENST00000516177 98 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AP000907.4-201ENST00000604143 237 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 RPL23AP88-201ENST00000605759 454 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AL449363.1-201ENST00000617815 186 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AL160394.1-201ENST00000624765 724 ntBASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
POLR1BQ9H9Y6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 SNORD114-19-201ENST00000363072 75 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 RNU6-105P-201ENST00000363909 104 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 RNU6-332P-201ENST00000391193 108 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AL117339.3-201ENST00000418733 162 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 BX276092.3-201ENST00000424182 230 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC092427.1-202ENST00000430569 476 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AL513124.1-201ENST00000450410 614 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC007547.1-201ENST00000462177 490 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AP001025.1-201ENST00000486139 332 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 TBCAP3-201ENST00000512475 312 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 RN7SKP40-201ENST00000517211 242 ntBASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1BQ9H9Y6 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms