Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.99□□□□□ -2.09
NXF3Q9H4D5 AL391646.1-201ENST00000603860 190 ntBASIC1.99□□□□□ -2.09
NXF3Q9H4D5 AC025449.1-201ENST00000603896 529 ntBASIC1.99□□□□□ -2.09
NXF3Q9H4D5 AL136363.2-201ENST00000604173 851 ntBASIC1.99□□□□□ -2.09
NXF3Q9H4D5 AC126118.1-201ENST00000607744 628 ntBASIC1.99□□□□□ -2.09
NXF3Q9H4D5 uc_338.11-201ENST00000619132 160 ntBASIC1.99□□□□□ -2.09
NXF3Q9H4D5 AC084768.2-201ENST00000622736 221 ntBASIC1.99□□□□□ -2.09
NXF3Q9H4D5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
NXF3Q9H4D5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU1-17P-201ENST00000363022 152 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 SNORA62.1-201ENST00000364287 154 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU4-75P-201ENST00000364621 146 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 SNORA16B-201ENST00000364674 135 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU6-658P-201ENST00000384606 106 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU6-748P-201ENST00000384648 107 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RPS3AP44-201ENST00000425466 790 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 MTCO2P19-201ENST00000427513 598 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC002486.1-201ENST00000435098 391 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL356010.1-201ENST00000456364 102 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC104806.1-201ENST00000508720 308 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 SNORA31.6-201ENST00000516241 130 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU6-572P-201ENST00000516724 80 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 RNU6-1183P-201ENST00000517054 60 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL138976.2-201ENST00000563989 694 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC025165.5-201ENST00000602802 578 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC091152.3-201ENST00000604227 325 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 BNIP3P10-201ENST00000605360 577 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 MIR8081-201ENST00000611533 95 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC024940.5-201ENST00000622889 474 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.98□□□□□ -2.09
NXF3Q9H4D5 U6.114-201ENST00000636407 96 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC009487.4-201ENST00000624969 3585 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AC131280.1-202ENST00000624067 4211 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 AL109809.4-201ENST00000603520 2185 ntBASIC1.98□□□□□ -2.09
NXF3Q9H4D5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 ZNF680P1-201ENST00000436625 1469 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 RNU6-371P-201ENST00000364283 108 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 Z98749.2-208ENST00000381646 500 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 SNORA75B-201ENST00000384053 137 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 SNORD116-4-201ENST00000384733 96 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 SNORA46.1-201ENST00000391069 153 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 MIR1294-201ENST00000408503 142 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 EEF1A1P40-201ENST00000412883 573 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AL596276.1-201ENST00000434465 418 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 FABP5P14-201ENST00000437273 393 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AL451074.3-201ENST00000437709 472 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC016691.1-201ENST00000441321 413 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 DYNLL1P5-201ENST00000467158 270 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 GMFBP1-201ENST00000467831 427 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC022493.1-201ENST00000492984 337 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC105417.1-201ENST00000514691 285 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 RN7SKP219-201ENST00000516825 296 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC078795.2-201ENST00000602835 1252 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AL670379.4-201ENST00000605279 254 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC007684.1-201ENST00000609671 477 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC017083.3-201ENST00000609955 700 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 HULC.1-201ENST00000612720 240 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 U4atac.1-201ENST00000618345 95 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AC073534.2-201ENST00000620377 381 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AL359740.1-201ENST00000624340 592 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 U6.99-201ENST00000637524 83 ntBASIC1.97□□□□□ -2.09
NXF3Q9H4D5 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NXF3Q9H4D5 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.1-201ENST00000352915 104 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNU6-1029P-201ENST00000384109 107 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNU6-166P-201ENST00000384371 107 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNU6-550P-201ENST00000391057 101 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL627390.1-201ENST00000396055 340 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNU2-9P-201ENST00000410194 145 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNU4-55P-201ENST00000410731 137 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNA5SP111-201ENST00000411386 101 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 OR6C66P-201ENST00000414917 930 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms