Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SEPT7P9-203ENST00000604116 343 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 MIR98-201ENST00000606724 119 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 AC004908.3-201ENST00000610248 625 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 RN7SL853P-201ENST00000617250 223 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 AC026585.1-201ENST00000619582 524 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 DUXAP9-208ENST00000622815 614 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 AC007792.1-201ENST00000623023 402 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
POLR1EQ9GZS1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 OOSP1P1-201ENST00000423265 274 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 BET1P1-201ENST00000482276 359 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC104806.1-201ENST00000508720 308 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 SNORA31.23-201ENST00000517219 133 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 CYCSP27-201ENST00000527643 293 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 MIR5692A1-201ENST00000580523 69 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC073539.2-201ENST00000597113 165 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC138649.3-201ENST00000622154 254 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AC011155.2-201ENST00000623202 216 ntBASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1EQ9GZS1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 RNU6-282P-201ENST00000365357 103 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 MIR1-2-201ENST00000384961 85 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 RAP1BP3-201ENST00000407180 549 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AC074117.2-201ENST00000417130 397 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 GPR143P-201ENST00000434155 205 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 MTND2P4-201ENST00000445034 1004 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 MTCO2P6-201ENST00000463134 685 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AP001025.1-201ENST00000486139 332 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 HMGB3P17-201ENST00000504195 649 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 MTND3P25-201ENST00000509243 135 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 MTCO3P28-201ENST00000513351 515 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 SNORA43.2-201ENST00000516652 128 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 RNU6-410P-201ENST00000517006 107 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 MIR3913-1-201ENST00000577744 102 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 Z82243.1-201ENST00000609432 473 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
POLR1EQ9GZS1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 SNORD56.1-201ENST00000362913 68 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 SNORA62.1-201ENST00000364287 154 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 RNU4-91P-201ENST00000364778 135 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 RNU6-116P-201ENST00000384042 109 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 RNU6-611P-201ENST00000384276 104 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 MIR29B2-201ENST00000385055 81 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 CBX3P9-201ENST00000402326 552 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AL513124.1-201ENST00000450410 614 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AL162395.1-201ENST00000457882 422 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AP003072.2-201ENST00000527756 676 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 AP002453.2-201ENST00000533503 320 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 BNIP3P6-201ENST00000549284 499 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 Z84480.1-201ENST00000605131 311 ntBASIC1.92□□□□□ -2.1
POLR1EQ9GZS1 MTND5P17-201ENST00000418405 1603 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC002543.1-201ENST00000299783 1954 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 Y_RNA.201-201ENST00000364052 96 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 RNU6-387P-201ENST00000411331 105 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 OR6C66P-201ENST00000414917 930 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC244505.5-201ENST00000443639 207 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC079781.2-201ENST00000446424 169 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 AC079448.1-201ENST00000449377 373 ntBASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.91□□□□□ -2.1
POLR1EQ9GZS1 RPL30P12-201ENST00000474666 353 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms