Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 MIR6134-201ENST00000617606 109 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
ABCA3Q99758 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
ABCA3Q99758 RNU6-529P-201ENST00000363383 104 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 SNORD114-6-201ENST00000364393 72 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 RNU6-45P-201ENST00000384471 107 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA3Q99758 C8orf59P1-201ENST00000429930 303 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA3Q99758 RNU6-333P-201ENST00000459117 107 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 AC074344.1-201ENST00000512823 224 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA3Q99758 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA3Q99758 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.26□□□□□ -2.37
ABCA3Q99758 BNIP3P24-201ENST00000593398 557 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 BNIP3P26-201ENST00000600827 554 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 AL590396.4-201ENST00000636779 956 ntBASIC0.26□□□□□ -2.37
ABCA3Q99758 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ABCA3Q99758 Y_RNA.571-201ENST00000384753 98 ntBASIC0.25□□□□□ -2.37
ABCA3Q99758 RPS3AP36-201ENST00000398190 775 ntBASIC0.25□□□□□ -2.37
ABCA3Q99758 RPL7P43-201ENST00000478876 753 ntBASIC0.25□□□□□ -2.37
ABCA3Q99758 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.25□□□□□ -2.37
ABCA3Q99758 MIR4667-201ENST00000578933 66 ntBASIC0.25□□□□□ -2.37
ABCA3Q99758 AC022432.1-201ENST00000595739 310 ntBASIC0.25□□□□□ -2.37
ABCA3Q99758 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
ABCA3Q99758 RNU6-923P-201ENST00000364753 107 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 RNU6-1237P-201ENST00000384777 107 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 RNU6-700P-201ENST00000391043 107 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 RPS26P5-201ENST00000418544 335 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA3Q99758 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.24□□□□□ -2.37
ABCA3Q99758 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.24□□□□□ -2.37
ABCA3Q99758 OR2AQ1P-201ENST00000451972 200 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.24□□□□□ -2.37
ABCA3Q99758 AC105758.1-201ENST00000506038 399 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC112220.2-201ENST00000605513 533 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC034229.4-201ENST00000607861 441 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC004009.2-201ENST00000623016 728 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 MIR409-201ENST00000362237 79 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AL451054.2-201ENST00000420896 202 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 RPL30P1-201ENST00000488676 339 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 RNU6-1092P-201ENST00000516955 87 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
ABCA3Q99758 AC002545.1-201ENST00000592511 181 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC012557.2-201ENST00000605919 418 ntBASIC0.24□□□□□ -2.37
ABCA3Q99758 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.24□□□□□ -2.37
ABCA3Q99758 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA3Q99758 AL391994.1-201ENST00000254724 282 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 Y_RNA.99-201ENST00000363138 105 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 SNORD18A-201ENST00000363753 72 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 MIR194-1-201ENST00000384892 85 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 RNU6-1054P-201ENST00000411293 104 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.23□□□□□ -2.37
ABCA3Q99758 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
ABCA3Q99758 MTCYBP40-201ENST00000509390 1135 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.23□□□□□ -2.37
ABCA3Q99758 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.23□□□□□ -2.37
ABCA3Q99758 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.23□□□□□ -2.37
ABCA3Q99758 AC091057.3-201ENST00000602684 733 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 RPL21P136-201ENST00000605378 396 ntBASIC0.23□□□□□ -2.37
ABCA3Q99758 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
ABCA3Q99758 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
ABCA3Q99758 RNU6-819P-201ENST00000364116 107 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
ABCA3Q99758 AL353621.1-201ENST00000418219 243 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA3Q99758 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 RNU6-528P-201ENST00000516926 100 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA3Q99758 AC068620.3-201ENST00000602749 560 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 MTRNR2L2-201ENST00000604882 87 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 AC242628.1-201ENST00000606810 391 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 AC138627.2-201ENST00000624202 601 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 ZNF849P-201ENST00000594711 1566 ntBASIC0.22□□□□□ -2.37
ABCA3Q99758 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.22□□□□□ -2.37
ABCA3Q99758 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
ABCA3Q99758 RNU6-30P-201ENST00000384561 107 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 RNU6-878P-201ENST00000384578 110 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 BET1P1-201ENST00000482276 359 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 PDCD5P2-201ENST00000507570 312 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 AP000763.2-201ENST00000540641 163 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA3Q99758 AC010133.1-201ENST00000615809 842 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 AC130454.1-201ENST00000622948 401 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 AC009950.2-201ENST00000636548 183 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
ABCA3Q99758 FARSBP1-201ENST00000435808 1778 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 RNA5SP361-201ENST00000362686 118 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 Y_RNA.185-201ENST00000363894 100 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 RNU4-12P-201ENST00000365233 139 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.21□□□□□ -2.38
ABCA3Q99758 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA3Q99758 MTND2P5-201ENST00000432656 1006 ntBASIC0.21□□□□□ -2.38
ABCA3Q99758 AC093259.1-201ENST00000509755 300 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms