Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.83□□□□□ -1.96
PKP4Q99569 Y_RNA.197-201ENST00000364004 102 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 RNU6-266P-201ENST00000364225 107 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 RNU6-1180P-201ENST00000364935 107 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 SNORA9.2-201ENST00000365361 133 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 SNORA48.5-201ENST00000391143 135 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC096649.2-201ENST00000416186 393 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 MTND2P23-201ENST00000422990 651 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AL592045.1-201ENST00000429867 352 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.83□□□□□ -1.96
PKP4Q99569 RPS15AP5-201ENST00000436276 388 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AL359672.1-201ENST00000442302 409 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.83□□□□□ -1.96
PKP4Q99569 ELOCP24-201ENST00000456370 334 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 RNA5SP471-201ENST00000516971 106 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.83□□□□□ -1.96
PKP4Q99569 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.83□□□□□ -1.96
PKP4Q99569 AC026371.1-201ENST00000551867 419 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 NACAP3-201ENST00000552100 481 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC006504.6-201ENST00000590142 199 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC073539.2-201ENST00000597113 165 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC098826.3-201ENST00000603823 466 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC005000.2-201ENST00000605468 310 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AL162730.1-201ENST00000605734 292 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC002044.1-201ENST00000606707 158 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 AC133104.2-201ENST00000615272 193 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 U2.21-201ENST00000637295 81 ntBASIC2.83□□□□□ -1.96
PKP4Q99569 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PKP4Q99569 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PKP4Q99569 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.83□□□□□ -1.96
PKP4Q99569 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
PKP4Q99569 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PKP4Q99569 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
PKP4Q99569 MTND5P10-201ENST00000603719 1809 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PKP4Q99569 RNU6-1167P-201ENST00000363227 94 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RNU6-512P-201ENST00000364438 103 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RNU6-214P-201ENST00000384130 107 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 MIR578-201ENST00000384828 96 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 MIR301A-201ENST00000385261 86 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 SNORA75.4-201ENST00000391278 119 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 NDUFB4P4-201ENST00000404822 243 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RN7SKP58-201ENST00000411010 305 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.82□□□□□ -1.96
PKP4Q99569 RPL26P27-201ENST00000414397 437 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.82□□□□□ -1.96
PKP4Q99569 AC092427.1-202ENST00000430569 476 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.82□□□□□ -1.96
PKP4Q99569 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.82□□□□□ -1.96
PKP4Q99569 AC098831.1-201ENST00000440661 216 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AL360271.2-201ENST00000447710 161 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.82□□□□□ -1.96
PKP4Q99569 RPL30P15-201ENST00000457129 321 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RNU7-138P-201ENST00000459479 64 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 S100A11P2-201ENST00000467589 312 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AP004217.1-201ENST00000480579 346 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AL163540.1-201ENST00000485382 386 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.82□□□□□ -1.96
PKP4Q99569 MTCYBP40-201ENST00000509390 1135 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC116337.1-201ENST00000509680 687 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 MRPS36P2-201ENST00000512569 299 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RNU6-1016P-201ENST00000516689 94 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 Y_RNA.711-201ENST00000516993 102 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 SCARNA11.3-201ENST00000517276 130 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC069113.1-201ENST00000517763 267 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC022080.3-201ENST00000544433 482 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PKP4Q99569 AC100830.2-201ENST00000581636 240 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.82□□□□□ -1.96
PKP4Q99569 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.82□□□□□ -1.96
PKP4Q99569 AC244517.12-201ENST00000623581 663 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AL512643.1-201ENST00000635735 524 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 Z99571.1-201ENST00000636677 394 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
PKP4Q99569 AC110491.1-201ENST00000562191 2010 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PKP4Q99569 RNU1-35P-201ENST00000362782 153 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 SNORD3E-201ENST00000362899 217 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 RNU6-1303P-201ENST00000364841 107 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
PKP4Q99569 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PKP4Q99569 RNU6-738P-201ENST00000384531 106 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 MIR606-201ENST00000384851 96 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 MIR128-1-201ENST00000384921 82 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 SNORA48.2-201ENST00000390926 124 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 RNU6-750P-201ENST00000390946 107 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 BPY2DP-201ENST00000422208 265 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 AL590632.1-201ENST00000424289 371 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 AL513043.1-201ENST00000439124 535 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 RPS15AP7-201ENST00000439294 405 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 RPS29P26-201ENST00000477483 171 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 AC096745.1-201ENST00000509945 370 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 AC008716.1-201ENST00000511084 513 ntBASIC2.81□□□□□ -1.96
PKP4Q99569 RNU1-54P-201ENST00000517181 120 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms